| Annotation |
|---|
| Description | jgi|Araly1|324761|fgenesh1_pm.C_scaffold_5002305 |
| Sequence |
ATGGGATTCT GCGAAAGAAA GGTATGCGGT AACTTGAGGC TACTGAGCAA AAATTCCCCC GTCTCTTCTA ACACGATGTA CTCTGCTTCG GCCATTTCGT TACCAACGTT TCGTCTCCAT TGTAGTATTC CGACAGAGCT ATCATCATGC CGTCCCAAGT TGAGCCGAAT TCAGACAAAC CCATCCATCG GGAAGCCCGT CCAAGTCCCT TCTCCGAAGC TCGCTTCTTT CGATGGAGGC CTTAATGAAG CTTTTCAACG GCTGGACGTC AACGGAAACA ACTCTCCAAT CGAAGCCTAT GCCTACCTTC TCGAGCTTTG TGGTAAAAGC AGAGCTCTCT CTCAAGAGAA AGTGTTTGAC GAAATGCGTG ACAGAACTGC CTTTGCCTGG AATGCGTTGA TCGGAGCCTA TGTTTCGAAT GCTGAACCTG CTTCCGCTCT CTTTATCTAC CGGAATATGC GTGTGGAGGG CGTTCCTCTC GATCTTTACT CTTTTCCTGT CTTGCTTAAA GCCTGCGGCA AACTTCGAGA CATCAGGAGT GGCACTGAGC TTCATTGTAT GCTCGTTAAA CTTGGCTTCA ATTCAACAGG TTTTATCGTC AATGCGTTGG TTTCCATGTA TGCTAAGACT GATCACCTAA GCGCAGCTAG GCGTCTCTTT GACGGATCCC AAGAGAAAGG AGATGCTGTT CTCTGGAATT CTATTTTGTC TTCATATTCC ACGTCTGGGA AATCTCTGGA GACATTACAA TTATTCAGAG AAATGCAAAT GACTGGTCCT GCCTCCAACA GCTACACTAT TGTTTCTGCT CTCACAGCCT GTGAAGGTTT TTCATATGCA AAGCTAGGGA AAGAGATCCA CGCTGCTGTC CTGAAATCAA CTCACTCTTT TGAAGTATAT GTGTGCAACG CCTTGATTGC TATGTATGCC AGGTGTGGTA AAATGCTTGA GGCAGGAAGG ATCCTTCGTC TGATGAATAA CGCTGACGTT GTCACATGGA ATTCTCTGAT TAAGGGATAT GTACAGAATC TCATGTACAA GGAGGCATTA CAGTTCTTTT GTGATATGAT CGCTGCTGGC CACAAACCCG ACGAGGTTTC ATTGACCAGT GTCATTGCAG CGTCAGGAAG ATTAAGCAAT CTGTTGGCAG GAATGGAATT GCACGCTTAC GTGATTAAAC ATGGCTGGGA TTCCAATTTG CTGGTTGGGA ATACGTTGAT AGATATGTAT TCAAAGTGCA ACCTCACATG TTACATGGGC CGTGCGTTTC TTATGATGCA TGAAAAAGAT CTTATTTCAT GGACTACAAT CATTGCTGGT TATGCCCTGA ATGATTGTCA TGTAGAGGCC TTACAACTCT TCCGGGATGT TGCTAAGAAA AGGATGGAGA TTGATGAAAT GATGCTGGGA AGCATCCTTC GAGCTTGTAG TGTGCTGAAA TCCATGCTCA TTGTCAAAGA AATTCATTGT CACATTTTGA GAAAAGGTTT AATTGATACT GTGATACAGA ATGAGTTGGT AGATGTTTAC GGAAAATGCA GGAACATGGG CTATGCTTCC CGAGTATTTG AATCAATCAA AGGTAAAGAT GTTGTCTCTT GGACGAGCAT GATTTCGTCT AGTGCTCTTA ATGGTAACGA AAATGAGGCT GTTGAACTCT TTCGACGCAT GGCTGAAACT GGTTTGTTAG CTGATTCTGT AGCATTGTTG TGTATACTGT CAGCTGCAGC AAGTTTATCT GCCCTCAAGA AAGGGAGGGA AATTCATGGC TACTTACTCC GGAAGGGTTT TTGCCTAGAG GGGTCCATTG CAGTTGCAGT TGTTGACATG TATGCATGCT GTGGAGATTT ACAGAGTGCA AAGGCTGTAT TTGACCGGAT AGAAAGGAAA GGTTTGCTAC AATACACAAG TATGATCAAT GCATATGGAA TGCACGGCTG CGGAAAAGCA TCTGTTGAGT TGTTCAATAA AATGAGGCAT GAAAACGTCT CACCCGATCA CATTTCATTT CTGGCACTTC TTTATGCGTG CAGCCATGCA GGTCTGCTTG ACGAGGGTAG AAGATTTCTC AAGATCATGG AACTTGAATA TAAATTGGAA CCATGGCCTG AACATTACGT GTGTCTGGTT GACATGTTGG GTCGTGCAAA TTGTGTAGTG GAAGCCTTTG AATTCGTCAA AATGATGAAA ACAGAACCAA CTACAGAAGT CTGGTGTGCA CTCCTTGCGG CATGCCGATC TCACTCAGAG AAAGAAATTG GAGAGATAGC TGCTCAGAGG CTTCTTGAGC TAGAACCTAA GAATCCGGGA AATCTTGTGC TTGTATCTAA TGTCTTTGCT GAACAAGGAA GATGGAACGA TGTAGAAAAA GTGAGGGCAA AAATGAAAGC AAGTGGAATG GAGAAACAAC CTGGATGTAG TTGGATTGAG ATGGACGGCA AGGTTCATAA ATTTACAGCA AGAGACAAGT CTCACCCAGA GACCAAAGAG ATATATGAGA AATTGTCCGA GGTTACTAGG AAGTTGGAGA GGGAATCAGG TTATCTAGCC GATACAAAGT TCATTCTGCA TAATGTAGAT GAAGGGGAGA AGGTTCAGAT GCTGCATGGA CATAGTGAGA GGCTAGCAAT TGCTTATGAA GGGAAAGAGA GAGATAGCAA GGGAATTCAA GACACTCATT TCTCTTTTCT CTTTGTGATT ATATCTGCTT TTAAACGCAC ACCTACCAAA CCCGTGGATG AATCTTTCAT AGATACACCT CTATCCCTCT GCATTCAAAC ACAAACCACA AATTGTGGTC TTTTAGATAC ATGGAGTCAA ACTAAGAATG GACCTTGGCG AAAGCTTCTT CATGGTCAAG ATTTAAAATC AGGTGGTGGA GATATAGGTA TGCAGGGCCG AGGCTCTAAT CTCTTCATAG CCCTATTGAT TTTCTGCTTC TTTAATTCGT GGTGTCTCTC TCCTTTTTAC CCAACCATCT CTTTAAATTT TCAACATCTT ATCTATCACG CCTCTTAA |
| Length | 3018 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 20005225.. 20009137 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G63370.1 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| TAIR curator summary | Encodes a chloroplast RNA editing factor. |
| Alias | [OTP86][ORGANELLE TRANSCRIPT PROCESSING 86] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 16.7332 |
Ahg951859 | Alpha amylase family protein |
| 19.4936 |
Ahg930357 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein |
| 20.8567 |
Ahg478409 | alpha-L-arabinofuranosidase 1 |
| 32.4654 |
Ahg948569 | Trypsin family protein |
| 32.5269 |
Ahg335224 | Pentatricopeptide repeat (PPR-like) superfamily protein |
| 41.7612 |
Ahg923061 | NC domain-containing protein-related |
| 44.5982 |
Ahg946991 | phragmoplast-associated kinesin-related protein 1 |
| 47.6025 |
Ahg946121 | Pentatricopeptide repeat (PPR-like) superfamily protein |
| 49.0918 |
Ahg343169 | endonucleases |
| 50.07 |
Ahg485899 | Sec1/munc18-like (SM) proteins superfamily |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|