| Annotation |
|---|
| Description | jgi|Araly1|335224|fgenesh1_pg.C_scaffold_1001789 |
| Sequence |
ATGGAAAAGC TCTTCGTACC ATCATTTCCC AAAACTTTTT TGAATTATCA GACTCCAGCA AAAGTGGAGA ATTCGCCTGA AGTTCATCCA AAATCCAGAA AGAAGAATCT ATCATTCACC AAGAAGAAAG AACCCAATAT CATTCCCGAC GAGCAATTGG ATTACTTGTG TAGAAATGGA AGTCTGCTCG AAGCTGAGAA AGCTCTGGAC TCTTTGTTTC AACAAGGTTC CAAGGTAAAA CGAAGCACTT ACCTCAACTT GTTGGAGTCG TGCATTGATT CTGGTTCTAT CCATTTGGGT CGTATCCTTC ATGCTCGGTT TGGTCTGTTT CCTGAACCTG ACGTCTTTGT GGAGACGAAG CTGTTGAGCA TGTATGCTAA ATGCGGGTGT CTTGTTGATG CCCGTAAGGT GTTTGATTCA ATGCGTGAGA GAAATCTGTA TACATGGTCT GCTATGATTG GTGCTTACTC GAGGGAGAAT CGGTGGAGAG AGGTCTCTAA GCTCTTTCGT TTGATGATGG AAGACGGTGT TTTGCCTGAT GATTTCTTGT TTCCCAAGAT TTTACAGGGA TGTGCGAATT GTGGAGATGT TGAGACTGGG AAGTTGATTC ATTCGGTGGT TATAAAACTC GGGATGAGTT CGTGTCTTCG TGTTAGCAAC TCTATTTTAG CTGTGTATGC GAAATGCGGT GAATTGGATT TCGCTACCAA GTTTTTTAGA CGCATGAAGG AGAGAGATGT GGTTGCTTGG AACTCAGTAC TGTTAGCTTA CTGCCAAAAT GGTAAACATG AAGAAGCTGT AGAATTGGTT GAAGAGATGG AAAAGGAAGG AATTTCTCCA GGGTTAGTTA CTTGGAACAT ATTGATTGGG GGTTATAACC AGCTAGGGAA ATGTGATGCT GCCATGGATT TGATGCAGAA GATGGAGAAT TTTGGTATAA CTGCTGACGT GTTTACGTGG ACTGCTATGA TTTCGGGTTT GATTCATAAT GGGATGAGAT ATCAGGCATT AGATATGTTT AGGAAGATGT TTTTAGCGGG TGTAGTGCCG AATGCAGTCA CTATTATGAG TGCTGTGTCT GCTTGTTCAT ATTTGAAAGT TATAAACCTG GGCTCAGAAG TTCACTCTAT TGCTGTGAAG ATGGGGTTTA TCGACGATGT GCTTGTGGGC AATTCTCTGG TTGATATGTA TTCAAAGTGT GGAAAACTGG AAGATGCAAG GAAAGTTTTT GATTCGGTAA AGAATAAGGA TGTATATACT TGGAACTCAA TGATAACAGG GTATTGCCAA GCAGGCTATT GTGGGAAGGC TTATGAATTG TTTACAAGGA TGCAAGATGC AAATGTAAGA CCAAATATTA TCACATGGAA CACGATGATC TCAGGATATA TTAAGAATGG AGACGAGGGT GAGGCTATGG ACTTATTTCA GAGGATGGAA AAAGATGGAA AAGTTCAGCG AAATACTGCA ACATGGAACC TAATTATTGC GGGTTACATA CAAAACGGAA AAAAGGACGA GGCCTTGGAA ATTTTTCGGA AAATGCAGTT TTCTCGCTTC ATGCCAAATT CGGTTACCAT TCTAAGTCTT TTACCCGCTT GTGCTAATCT TCTTGGGACA AAAATGGTAA GAGAGATACA CGGTTGTGTA TTGCGGAGAA ACCTAGATGC TATTCATGCC GTTAAAAACG CTTTAACAGA TACTTATGCT AAGTCAGGGG ATATAGGATA TTCAAGAACC ATCTTCATGG GTATGGAAAC GAAAGACATC ATAACTTGGA ACTCGCTGAT TGGAGGTTAT GTTTTACATG GTAGCTATGG TCCAGCTCTT GAACTTTTTA ATCAAATGAA GACACAGGGG ATTAAGCCGA ATAGGGGAAC TCTTTCGAGT ATTATTCTTG CACACGGTCT AATGGGAAAT GTAGACGAAG GAAAGAAAGT CTTCTACAGC ATTGCGAATG ATTACCATAT TATTCCTGCT CTGGAACACT GTTCTGCTAT GGTATCTTTG TATGGACGAT CCAACAGACT TGAAGAAGCT CTGCAGTTTA TCCAGGAGAT GAATATTCAA TCAGAGACAC CCATCTGGGA AAGCTTCTTA ACTGGCTGCA GGATTCATGG TGATATTGAC ATGGCAATCC ATGCCGCAGA GAACTTATTC TCCTTGGAAC CTGAAAATAC GGTCACTGAA AATATTGTTT CGCAGATCTA TGCATTAGGT GCAAAACTTG GGAGGTCATT AGAAGGAAAG AAGCCGAGGA GAGATAACTT GCTGAAGAAA CCTCTTGGGC AGAGCTGGAT TGAAGTCAAA AATTTAATTC ACACATTCAC GACAGGTGAT CAGTCGAAAT TATGTACTGA TCTTCTGTAT CCCTGGGTGG AAAAAATGTG TAGGCTGGAT AATAGAAGTG ACCAATATAA TGGAGAACTT TTGATCGAGG AAGAAGGAAG GGAAGAAATT TGTGGAATCC ATAGCGAAAA AATTGCCATG GCGTTTGGTC TCATTTCCTC ATCCCGTGCA CCTAAGGCGA CGATAAGGAT CTTGAAAAAT CTTAGGATGT GCCGAGACTG CCATAATACT GCAAAGACAC AAGATGCTTG CACCACTTTA AGAATGGAGA TTGTTCCTGT AAAGATTATT GGTAGAGTGA TTAGCCAATC ACTAAGAAAA TCCCCAACCA CAAACAGTGT TGAAGGCAAG CCTGCATCAG TCGGCCCATG GGGAGGCCAA TGTGGTCATG CCTGGGATGA TGGAATGTAC ACCACAGTAA AGCAAATAAT TATAGCCCAT GGTTCTGGAA TAGACTCCAT ACAAGTTGAG TACGACAAAA ACGGTAGCTC TGTTTGGTCT GAAAAACGCG GAGGAAAGGG AGGCAAGAAG TTTGATAAGG TCAAACTTGA TTACCCACAT GAGTATCTGA TTTCAATCAA TGGAACATAC GGTAGCTTTG ACGTCTGGGG AACTTTATGT GTCCGATCAC TTACTTTTGA GAGTAACCGC AGAAAATATG GACCATTTGG TGTTGAGTCA GGTACATTCT TCGCATTACC AAAATCAGGG TCAAAGATTG TTGGGTTCCA TGGGAAGGCT GGTTGGTATT TGGATGCTAT TGGTGTTCAC ATTCAGCCAG TTCCTAAAGA GAATAATCCT TCGTCGAAAA TCCTTTTGCA TTCGCATCAA AGTTTCCCTC AGGGTGATAA GAAACATGAG TACTCAGTGA TACAAGGAAG TGTAGGGCAA AACTTTGATA TAGTTGTTGC CCTCAGAAAG AAAGATCCAA CTTTGCCTTC TTTTGAATCC CGGGATTCCG CAGGTGCCGA GATCACCAAA CATAAGTTGG TGACAGATAC TGAGAAGTCA CAGTCAAAAG TTGAAGGTGG CGCGAAAACA TATGGACCAT GGGGTGGAAC CGGTGGTATC ATGTTTGACG ATGGGATTTA TACCGGTATC AGACAAATCA ATTTGTCACG TAGTGTCGGG ATTGTGTCGA TAAAGGTCTG TTATGATTTT AGAGGACAAG CTGTGTGGGG AAGCAAACAT GGTGGCATGG GAGGATTCAA ACATGATAAG ATTGTATTTG ACTACCCATC AGAGGTTTTA ACACATGTAA CGGGAACATA TGGGCCGCTG ATGTACATGG GACCTAATGT GATAAAGTCA CTGACTTTCC GCACCAACAG AGGAAAACAT GGACCTTATG GAGAAGAACA AGGTCCTTCT TTTACACATC AAATTGATGA GGGTAAAGTT GTTGGATTCC TTGGAAGAGA GGGTTTGTTT CTTGATTCCA TTGGTGTTCA TGTTATGGAA TGCAAGATAA GTTCCCTTAA GCCAGCATCT CCTAACAATT CAATTGTTCC TCATAATAAC TCCGGCACTG CGCAAATCGA AAATTCCCCA TGGGCTAATA AGCTAGTCCT TGCAGCAAAC GGCCATGGCG AAGAGGTTGA TCGTGGAGTC GTCAAAGAAC CAACACCGAG CGGTTCTGGA CCGTGGGGAG GCGACGGAGG TCAAGCTTGG GATGATGGAG TATTTTCAGG GATCAAGCAG ATATTTGTGA CAAGAGGAAA TGATGTTATC TCTTCAATAC AAGTCGAGTA CGATAGAAAT GGACAATCTG TTTGGTCCAC TAAACATGGT GGTGATAACA ATGGAGTCGC CACACACAGA ATTAAACTTG AGTATCCAAA CGAAACGATC ACCTGCATTT CAGGGTATTA CGGACCTCTG AACAATTCAG ACAGATATAA TGTTGTCAAG TCTCTGAGTT TTTACACGAG CCGTGGGAAG TATGGTCCAT ACGGTGAAGA AACCGGGACG TTTTTCACTT CAACTACAAC ACAAGGAAAA GTTTTGGGGT TCCATGGAAG GAGTAGCTCG CACTTGGACG CCATTGGAGT GCATATGCAG CATTGGCTTG GCAACAATAA GCCTTATTAC AGCAGGGCTA GTTGTTTCAA GCTCTTTTCA TAA |
| Length | 4473 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 7978498.. 7984144 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G19720.1 |
| Description | Pentatricopeptide repeat (PPR-like) superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.12311 |
Ahg922878 | SEUSS transcriptional co-regulator |
| 7.48331 |
Ahg471402 | copper chaperone for SOD1 |
| 7.48331 |
Ahg491448 | Sec23/Sec24 protein transport family protein |
| 8.66025 |
Ahg920472 | Inorganic H pyrophosphatase family protein |
| 9.48683 |
Ahg471206 | alpha/beta-Hydrolases superfamily protein |
| 9.94987 |
Ahg318028 | |
| 10.3441 |
Ahg933211 | copper/zinc superoxide dismutase 2 |
| 10.9545 |
Ahg322444 | |
| 12.1655 |
Ahg470505 | Calcium-binding tetratricopeptide family protein |
| 12.2474 |
Ahg899328 | Protein phosphatase 2C family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|