| Annotation |
|---|
| Description | jgi|Araly1|485899|fgenesh2_kg.5__1891__AT3G54860.1 |
| Sequence |
AAACGGAGAA AGGTCGATCA TCTGTTGTTC ATCGTCCATG GCGCAGATCC CCAGCTTGGA AAATGCTCCT CTCAATCTCA AATCCATTAG GGACAAGTCT GAGAGGGAGC TCGTAAACTT GCTTAAAGAC ATTCGTGGAA CTAAGTGTTT GGTTATTGAT CCAAAGCTCA GTGGTTCAGT CTCATTGATC ATCCAGACGT CTAAGCTGAA GGAACTTGGT TTGGAGTTAC GACATCTTAC TGCGGAACCA GTTCAGACTG AATGCACAAA AGTGATTTAT CTTGTTCGCT CTCAACTCAC TTTTATGAAA TTCATAGCTT CTCACATTCA GAATGATATT TCAAAAGCGA TTCAGAGAGA CTACTATGTT TACTTTGTTC CTCGTAGGTC AGTTGCGTGT GAGAAGATTC TTGAGCAAGA AAAAGTGCAT AACCTGGTTA CTGTGAAGGA GTTTACCCTG TATATGGTTC CACTAGATGA GGATGTTATT TCATTTGAGC TCGAGCTCTC TGAAAAGGAT TGCCTTGTGG ATGGTGATGT TAGCTCACTT TGGCATGTCG CAAAAGCCAT CCATGAACTT GAGTTTTCTT TTGGAGTTAT ATCGAAAGTG AGGGCCAAGG GCAAAGCATC AGTTCGTGTT GCTGATATAC TAAACCGCAT GCAAGTGGAG GAACCTGTCA ATTCAAATGA TGTGGGAAGG CCTGAAGTGG ATACACTCAT TCTATTGGAT AGAGAAGTTG ACATGGTTAC TCCTATGTGT TCCCAGTTAA CTTATGAGGG ACTGATAGAC GAGTTTTTGC ATATCAGCAA TGGAGCTGTC GAGGTCGACT CATCTGTGAT GGGTGCTCAG CAAGAGGGAA AAAAGATGAA AGTTCCCCTT AATTCAAGTG ATAAGTTGTT CAAGGAGACA AGGGATCTCA ACTTTGAAGT CGTTGTACAG GTTCTACGTC AGAAGGCAAC ATCCATGAAG GAGGACTACA CGGAAATTAA TTCTACCCAG ACAGTTTCTG AGCTAAAGGA CTTTGTTAAG AAGCTTAACT CTCTACCAGA GATGACAAGG CACATACATC TTGCCCAGCA CCTGACAACG TTCACATCCA AGCAATCATT TCTTTCGCAA CTTGATATGG AACAAACACT TGTTGAGGCA GAAAGTTATG ACATATGCTA TGAGTACATA GAAGAGATGA TCCATAAACA GGAGCATCTC ACTAATGTCT TACGTCTATT AGTCTTATTT TCTGTTACAA ACTCAGGGTT ACCAAAGAAG CAATTTGATT ATATAAGAAT GGAACTACTC CACAGTTATG GGTTTGAGCA TGTGGTCACA CTGAACAACT TGGAAAAAGC AGGATTGTTG AAGAAGCAGG AGTTTAAAAG CAACTGGCTG ACAGTGAAAC GTACACTGCA ACTTATCGTA GAAGACACTG ATACGTCTAG GCCTAACGAT ATCGCTTATG TCTATTCTGG ATATGCTCCT CTAAGCATTC GTCTTATCCA ACAAGCTATT CATTCGGGAT GGCGTCCTGT GGAGGACATT TTGAAGCTGT TACCAGGACC CCATCTGGAG ACTAAAAGAA GTGGATTCCC AAGCAGTCCA TCAGTTGATT CATTGCACGG AGCTTCAAAT GGGGTTGCTG ATGGAAGACG CTCAATTGTT CTTGTTGTCT TCATTGGTGG TGTAACATTT GCTGAAATCT CTGCTTTACG GTATCTCGCC TCTAAGGAAG AAATGGCTTA TGATTTGATT ATTGCCACAA CAAAAATCGT CAATGGCGCA ACGTTGATAG AAACATTCAT GGAAAAACTA GGCTGATCCG TAAACAGAGC GTTATGTTTC ATCTATCTCT TTCCAGTGTG TTTTATTTGT TCATTTTTTT GTATGTCTTT GTTTATTTTT CTGGATCTTT GTGGTTGCAG AGTGAATGGT ATTGAGATAC AGCGTGATTA TACAAATTCA AT |
| Length | 1962 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 16259555.. 16265440 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G54860.2 |
| Description | Sec1/munc18-like (SM) proteins superfamily |
| TAIR curator summary | Homologous to yeast VPS33. Forms a complex with VCL1 and AtVPS11. Involved in vacuolar biogenesis. |
| Alias | [ATVPS33][VPS33][VACUOLAR PROTEIN SORTING 33] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 10 |
Ahg484365 | serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta |
| 12.4097 |
Ahg495650 | |
| 28.1425 |
Ahg925100 | RNA helicase, ATP-dependent, SK12/DOB1 protein |
| 28.1425 |
Ahg488963 | TRICHOME BIREFRINGENCE-LIKE 5 |
| 31.1769 |
Ahg944149 | Remorin family protein |
| 36.5513 |
Ahg482729 | ABC-2 type transporter family protein |
| 37.7889 |
Ahg327309 | H(+)-ATPase 3 |
| 39.7995 |
Ahg941602 | alpha/beta-Hydrolases superfamily protein |
| 42.8486 |
Ahg944613 | myosin, putative |
| 44.8999 |
Ahg481646 | sec23/sec24 transport family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|