Detail



ID : Ahg488867

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488867|fgenesh2_kg.6__2001__AT5G19740.1
Sequence
ATATGATTAT CTAAGAAGAA GCTCCATTGA TGTCGAAATC AAAACCTCTA GCCTTCATAG TCGCTGCTTT ATCTTACTCC TTCTTCCTCT TCTCTTCTTC ACCAAAGTCT CACTACCACG AGCTCTTCCT CTCTGATTCC TTCTCCGACA ACGCTTCCGT CGCTCTAAAC CTCCGTACCC TCACGCGCCG CCCTCATGTA GCCGGTACAG TAGCCAACGC TGAAGCAGCC GCATATGTTC GCTCTGTTTT CACCTCCTCT GCTCTCAAAT CACACGTTGT TACTTACCAA GTATCTCTAA CTTACCCAGT TCATCGCTCT TTGGTACTAA CGCCCACAGA ATCCGCAAAG CCGATCACTT TCTTGCTGGA ACAAGAACAA GCCGGAGACA ATCCTTATGC TAATGAAGTG ATGCCTACTT TTCATGGATA CGCTAAGTCA GGTAATGTTT CAGGTCCAGT GGTTTATGCA AACTATGGAC GAGTGGAAGA TTTCTTGAGA CTCAAGAAAG ATATGGGTGT GAATGTCTCT GGAGCTGTTG TAATCGCGAG GTACGGTCAG ATATACAGAG GAGACATTGT GAAGAACGCT TACGAGGCAG GAGCTGTAGG TGTTGTGATA TATACTGATA AGAGAGATTA CGGCGGAGAT GAGTGGTTTC CGGCTAGTAA ATGGATGCCA CCGAGTGGGG TTCAGGTTGG TACTGTTTAT AACGGGTTAG GTGATCCAAC GACTCCTGGG TGGGCAAGTG TTGATGGGTG TGAGAGATTG TCGGATGAGG CGGTTGAATT GAGCGGTGAT GTTCCGCTTA TACCGTCGTT GCCTGTCTCG GCTGCTGATG CAGAAGTGAT TTTGAAGACG GTTGTCGGAG ATGTTGGTGA TGGAGATATT TATCCAGTGG GGCCTGGACC TGGAATCTTG AACCTGAGTT ATACTGGGGA AACTGTTATA GCCCAGATTG AGAATGTTAT TGGAGTGATT GAAGGAGAAG AAGAGCCTGA TAGATATGTG ATTCTTGGGA GCCATAGAGA CGCTTGGACT TTTGGAGCTG TTGACCCGAA CAGTGGCACT GCGGTACTTT TGGAGATTGC ACAAAGACTA GATAAGCTGC AGAAAAGAGG ATGGAAGCCT CGACGGACGA TTATTCTGTG CAATTGGGAT GCTGAGGAGT ATGGCCTGAT TGGGTCAACA GAATGGGTAG AAGAAAACAG AGAGATGCTA ACATCAAGAG CAGTGGCCTA CCTGAATGTA GATTGTGCGG TATCTGGCCC CGGATTTCAT GCCTCAGCAA CTCCACAACT CGATGAATTG ATAAAAATAG CTGCTCAAGA GGTCCGGGAT CCAGATAACG CAGCGCAAAC AATCTATGAT TCGTGGATAG GATCAAGTAA CTCTGTTGTG ATCGGAAGAT TAGGGGGCGG AGGTTCGGAT TACGCATCAT TTGTACAACA TGTTGGCGTT CCAGGAGTTG ACATGTCCTT TGGAGGAGGC TATCCAGTCT ATCACTCTAT GTATGATGAC TTCACTTGGA TGGAAAAATT TGGAGACCCT ATGTTTCAGC GACATGTCGC AATGGCTAGT GTTCTTGGTT TGGTCGCTCT TCGGTTAGCA GACGAGGAAA TCTTACCATT CAACTATACT TCCTATGCAC TAGAACTCAA GAAAAGCGCG GAAGATTTGG AGAATGAGAA GTTAGGCCAT AACATATATG TATATCCATT GATAAAATCG ATCGAAGATC TATCTACGGC TGCACAATAT ATAAACATAG AGAAAGAGGC AGTTAAAGGA GCTTTTAAAG TGAGAGAGCT TAATGACAGA TTAATGATGG CGGAACGAGC TTTAACAGAC CGAGATGGAC TCTCTGAAAG ACCATGGTAC AAGCATTTGA TATACGGACC ATCGAAGTAC GATGACTACG GTTACGGATC GAAATCATTC CCTGGAGTTG ATGATGCAGT TGACAATGCA AAGAAGCTAA ACACAAAAGC ATCTTGGGAA AATGTTCAAC ACCAGATTTG GAGAGTCTCT AGAGCTATAA GACAAGCATC ACTTGTCTTA AAAGGTGAAC TGAGATGATT GCATCAGCAC AATGATGTGA ACATAATGAA GACAGAT 
Length2117
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7961983.. 7964850
Download Sequence
A.thaliana
AGI-codeAT5G19740.1
DescriptionPeptidase M28 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.198 Ahg910238 callose synthase 1
12.6491 Ahg326224 copper/zinc superoxide dismutase 3
19.4936 Ahg473945 calcium-dependent lipid-binding family protein
31.1769 Ahg489556 Protein of unknown function (DUF1624)
31.225 Ahg951337 Mitochondrial substrate carrier family protein
33.3167 Ahg918912 secretion-associated RAS super family 2
36.0832 Ahg495025 Leucine-rich repeat transmembrane protein kinase family protein
40.4969 Ahg470098
41.5331 Ahg329750 trehalose phosphatase/synthase 5
43.3705 Ahg491310 CBS domain-containing protein with a domain of unknown function (DUF21)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression