Detail



ID : Ahg490794

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490794|fgenesh2_kg.7__227__AT4G40050.1
Sequence
TTCCCATTGA TTAGTCTTTC TCTCTCTCTC TCTCTAGAGC CGATGATAAA CGACGGCGGT TTTCACCGGA ACTGAGGGAA ATTAGCTGTC ACATGGCGGG TGAAGATGTT TCAAGCAATT TCCGAGCTTT GGTGGAGAAC GCTGACCGGA AATTCGCCAG AGTTCGCGAT CTTCCTGCGT TTGGACGAGC ACAGAGTCAC TACTTCCAAA AGGTTTTCAA AGCTTATATG AAACTATGGA ATTATCAGCA ATCTTATAGG TCGAAGCTGG TCGAGTCCGG TTTAAACCGA TGGGAAATCG GCGAGATCGC GAGCCGGATT GGTCAGCTTT ACTTTAGTCA GTACATGAGG ACTAGTGAAG CTAGGTTTCT TCTTGAGGCT TATGTCTTCT ATGAAGCGAT TTTGAGGAGG AGGTACTTTG ATGAAGCTCA AGGGAAAGAT CTTGGTGCTC GATTTAAGGA GTTACGGTTT TATGCGAGGT TTTTGCTTGT TTCCTTGATT GTTGATCGGA AAGAAATGGT TTTGCATTTA GCTGAGAAGC TTAGGGTTTT GGTTGATGAC AGCAAATCTA ATTTCAGGGA GACAAACTTT AAGGAGTGGA GGCTAGTTGT GCAAGAAATC ACTCGGTTTA TTAAATCTGA TACAAATTTA ACTTATGTTA GGCCTCTACG TTATTGTGCA ATGCTTGATT CATATCCAGC TTCTCAAACA TATCTAGCGC GGTTCCACGC TAAGAAGTTG TTTAAGTTTC GTGATGCTCT TTTGGCTAGT TATCACCGTA ATGAGGTGAA ATATGCTGAA GTCACCTTGG ATACGTATAG AATGATGCAG TGTTTAGAAT GGGAACCCAG TGGATCTTTT TACCAAAAAC GGCCTGTTGT TGAAGCGAAG GAGAATGGTT TTGTGATTGA TCATACTTTA ACTTCTGGGC TTATAGATAT GAAGTTGGCT GCCGATATGG CTGATCCATC ATTACCTCCT AATCCTAGAA AAGCAATTCT TTATCGTCCC ACGGTATCTC ACTTGCTAGC GGTCTTGGCA ATGATTTGTG ATGAGCTCTC TCCTGAGACT GTGATGCTGT TATATTTGTC AGCTTCAGGT GGTCCTGCTC GTGATAATGT TGCGCAACCA GAGAACTTTG TCGGTTCAAG CAGAACATCA AAAAGCAAGC TGCTTGCACG AGCCTCCCAA GAACAGAAAA GTTACAAGTC AGAACCACAT AGCAATGGAA AAATGTCGTC TGGTGATTAT TATGAGGATC ATCTCTGGTT AGGTCCTAGA GGAGGCTCTG GTTCAAACAA TCTTTACCCT GGTGATCTAA TCCCTTTTAC ACGGAAACCA CTTTTCTTGA TCATTGATAG CGACACTAGC CGTGCATTCA AGGCAGTAAC TGTTTTGGGT GGCGCAGAGA GAGGCGAGCC TGTTGCTATG CTTCTTTCTC CTCTGAAGCC ATCATTCGAG AACCCATCTA CTGATGATGA TACAGAAGCA CTAAACGGAA GTCAGTTTAC TTTTTTCTTA ACAGCTCCTT TACAAGCATT CTGTCAAATG CTTGGCCTCT CAAACTCAAA CCCCGACCCT GAAGTTTATG ATGAAGCAGA GAGCATACTT TCTGCTTCCT TTTCTGAGTG GGAAACGATT CTCTTGACTT CCAAAGTCTT GAATCTTGTC TGGGCACAGG TCTTGCCAGA TCCATTCTTG AGACGGCTGA TTCTCAGATT CATATTCTGC CGGTCTGTAC TCACTTCCTT CATCCGCACA GAGGATCATG ACCTGTATCT ACCTCAATGC CACCCGAATC TCCCAGACTC GATCTCACCG GTATCTAAAC CAGTGCAGTC CTCAGTACAA CGACTAGCTG ACCACTTGGG TGTTGCCAAA TCTTTCCACT TCACCAAATC ATAAAACTAG AAAAACCCAA GGTTGGTGGG TGAGATAGTA GGTTGTTTGT TCGTTTTTTA TAGAGAAGTC TGTATTTTTT TTAGGGTATA AAGAAAGAGA AAATTGTAAT TTTTATTTTG ATTTGATGAT TCTTTAGTTT TGTCCTTTGT AAAAGATTAG AACCAGGTAA TAATCATTAG TCTCTTCTCT AGGATGGTTT GCTTTGTGTA CAAGGAGAGA TTAACAATAT ATGTGCATTC CTTTAAAGAA AGTGTGACAT TTTTGTTCTT TCGCTTTTTC ATATTTTAAG TTTGAGCTAA GAACGAAATA AAGATTG 
Length2217
Protein Sequence
Protein Residue
Map Locationscaffold_7: 845346.. 848331
Download Sequence
A.thaliana
AGI-codeAT4G40050.1
DescriptionProtein of unknown function (DUF3550/UPF0682)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.4641 Ahg484824 dicer-like 3
5.2915 Ahg486936 HEAT repeat-containing protein
13.5647 Ahg326224 copper/zinc superoxide dismutase 3
16.1245 Ahg355292
17.8885 Ahg933310 vacuolar proton ATPase A1
20.347 Ahg491024 phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases
22.1359 Ahg482103 ACT domain-containing small subunit of acetolactate synthase protein
27.7128 Ahg314063
32.3265 Ahg311385 RNA-binding (RRM/RBD/RNP motifs) family protein
32.909 Ahg490509
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression