Detail



ID : Ahg326421

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|326421|fgenesh1_pm.C_scaffold_6001641
Sequence
ATGAAAGATA ACGAATACAT ATTGAATTAT TACAGAGCTG ATTGGTCCAT TAGAGATGCT TTCTTCAGCG TCTTTAGTTT CCACAATGAG TCTCTCAACG TTTGGACACA TTTAATTGGT TTTATCTTAT TTGTGGCACT AACCGTCGCC AACATTATTC ATCACGATGG ATTCTTCCCC GTGGATGCAA AGAGTCCAGG GAATGTAACA AGATGGCCAT TCTTCGTTTT CTTAGGAGGC TCAATGTTCT GCCTACTCGC AAGCAGCATT TGCCACCTCT TCTGTTGCCA CTCAAAAGAC CTTAATGTCT TCCTTCTCCG CATAGACTAT GCCGGTATCA CCGCCATGAT CATCACTTCC TTCTTTCCAC CAATCTTCTA CATCTTCCAA TGCACTCCTA GGTGGTACTT CATCTACCTC GCAGGCATCA CTTCCATGGG AATCTTCACA ATCATCACAC TTTTCACCCC ATCACTTTCC GCTCCCAAGT ACCGAGCTTT CCGCGCATTG CTCTTCGCCT CCATGGGGCT CTTTGGGATT GTCCCAGCTG TCCACGCGCT AGTGGTCAAC TGGGGAAACC CGCAAAGGAA CGTGACACTC GTGTACGAGT TGCTTATGGC AGTGTTCTAT CTTGTTGGAA CAGGATTTTA TGTAGGGAGA GTGCCCGAAA GGCTTAAACC GGGATGGTTT GATCGTGTGG GACATAGTCA TCAGATCTTC CATGTGTTCG TTTTGTTGGG TGCTTTGTCT CACTATGCAG CTGCTCTCTT GTTCTTGGAC TGGCGTGACC ACAAAGAAAA GAAGAGAAAC AGAATCGAGG AAGGTTTAGC AAAATCGAGA GCTGCCATAC GTGAAGCCGT GAGGCTGAAG AAGTTTGCAT CGGACAAGGA GGAAACTTCT GTTCCTCGTG GAGCTGTTTA CAGAAACGCT TTTGCATTTC ATCAAAGCCA TATGGAGATG GAGAAGAAAT TCAAAGTGTG GGTGTACAGA GAAGGAGACA CACCGTTAGT TCACATGGGT CCAGTGAACA ACATATACAG CATTGAAGGC CAATTCATGG ACGAGATCGA GACAGGGATG AGCCCATTCG CTGCTAGCGG CCCCGAGGAG GCTCATGCCT TTCTCCTCCC TGTCAGCATC GCCAACGTCG TTCATTACTT ATACAGGCCG CTCGTGACCT ACTCGAGGGA ACAACTTCAC AAAGTTTTTC TTGACTACGT CAATGTTGTG GCTCACAAAT ATCCTTATTG GAACCGAAGC CTTGGAGCCG ACCATTTCTT TGTTTCTTGC CATGATTGGG CACCAGACGT CTCAGGATCT AACCCGGAGA TGATGAAAAA CCTGATAAGA GTTCTCTGCA ACGCCAACAC ATCGGAAGGT TTCATGCCCC AACGAGATGT CTCAATCCCG GAGATCAACA TCCCCAGAGG CCAACTGGGA CCACCTCAAT TATCCCGCTC TTCTGGCCAT GACCGACCCA TCCTTGCTTT CTTCTCAGGG GGCTCACACG GTTATATCCG CAAAATTCTA CTGCAGCACT GGAAAGACAA AGATGAGGAG GTCCAAGTCC ACGAGTACTT AACCAACAAC AAAGACTACT TCAAGCTCAT GGCTACGGCA AGGTTCTGTC TCTGTCCCAG TGGCTATGAA GTGGCTAGCC CTCGAGTCGT TGCAGCCATT AACCTAGGTT GCGTCCCTGT CATCATCTCT GATCACTACG CCTTGCCCTT CTCAGACGTT CTTGATTGGA CTAAGTTCAC CATTCATGTT CCCTCTGAAA AGATCCCTGA GATCAAAACT ATACTAAAGA GCATATCCTG GAGACGCTAC AAGGTGTTGC AGAGAAGGGT TTTGCAGGTC CAGAGACATT TTGTGATCAA CAGACCGTCG CAACCGTTTG ATATGCTTCG AATGCTTCTT CACTCTGTTT GGTTGAGAAG ACTAAACCTG AGGTTGCCTT TGTGA 
Length1965
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8150676.. 8156414
Download Sequence
A.thaliana
AGI-codeAT5G20260.1
DescriptionExostosin family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
18.735 Ahg474081 long-chain acyl-CoA synthetase 2
20.9762 Ahg494617 Protein of unknown function (DUF3741)
24.8395 Ahg488422 Pollen Ole e 1 allergen and extensin family protein
28.775 Ahg494567 Zinc finger C-x8-C-x5-C-x3-H type family protein
35.4965 Ahg918720 Fatty acid hydroxylase superfamily
36.3593 Ahg481491 Leucine-rich receptor-like protein kinase family protein
36.5787 Ahg945606 thylakoid lumenal 17.9 kDa protein, chloroplast
36.7831 Ahg924996 Pectin lyase-like superfamily protein
38.1838 Ahg478894 mechanosensitive channel of small conductance-like 5
47.0532 Ahg909785 subtilase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression