Detail



ID : Ahg494617

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494617|fgenesh2_kg.8__433__AT5G43880.1
Sequence
TCGGTGATGT CACCATAATC TTCTTCTCGA CTCTATAGCC GAAAAAGCTT CCACCTTTAT CACCTTAATC GAAACTCCGG CGATAAAGCT TCTACATTTA AGGTCTAAAT TCCGAAACTC CGGCGAGAAA GCTTCTACCT TTATTGCTTA AATTGAACCT CCGGCGGAAT TTCAACCGGA GAATGCAGAT TCCGGCAGAC AGGCGGTGAA GAAATGAATA AGCAACGAAG AAGAAACGTT CAGGCTCATG GATGTTTAGG TCGGATGGTT AATCTGTTCG ATTTTGGAAC AGTTGGTAAT GGAAAGAAGT TGCTCACTGA GAAACCCTAT TTTGATCATG GGTCTATCAA GAGGAATCAG TTTGATCATA TAGAAGATAA AGTTGATGTG AGGAATGGTG GAGTCAATGG AACACCGATG AAGATGCTTT TAGAACAGGA AATGTCGAAA GAGATGGAAT TTAAGCTCAG TTCGACAAAT TTGGTTGCTA AGTTAATGGG TCTTGATTCG TTTCCTCAGA CACAATCTGC TCCAAGGAGT AATAGTTCAA AGCCTCGTCT AAAGAGGTCG TTGAGTCATG GGGAGGATAA AGATGTCTAT GAGATTTGGC AGAAACCTGG GGAGTTGAGT AGTAATGGTG TGGAGGGTTT AAGCAAGAAG AAGATGGACA TTGTACGCCA AAAGTTCTTG GAGGCGAAAC GTTTGGTTAC AGACGATAAA CTTCGACATT CTAAAGAGTT TCAAGAAGCT ATGGAAGTTT TGAGTTCGAA CAAGGAGTTG TTCCTCGAGT TTTTGCAGGA ATCGAATAAC TTCTTCTCTC ATCATCTCCA CAGTTTCCAG TCTACAGATG CACCAACCTC AGAGAAGTCT AAGCGGATCA CTATTTTGAA GCCTTCAAAG ACCATTGATG GTGAGGCAGC CATTGAATCT TCGAAGGACG GAATTAAGAG TGGTAAAGGT CTTGATTTGT TCAAATGGCC TGTTAAAGAA GAATATCCGA CAAAGCAATC AACTCGAATA GTTGTTCTGA AACCTAATGG CCATGTCACA AAGGCTTCAT CATGTCCAAC CTCTCCAAGA GGTTCTGAGG AGAGAGAGTC AAGAGATGTG GCTAGGAGAG TGAAGAGCCA GATACTTAAG GAAGAAACTT TACAATCTTC TGGCTTCTCC AACGGCTATA TAGGCGATGA TAGTTCTCTT AATGACTATG CAGATTCTGA AATCATGTCA CCGGTTTCTA GGCATTCATG GGATTATATT AACAAGTACG ATAGCCCTTT TTCTTCTTCG CCCTTTAGCA GAGCCTCGGG TTCTCCGGAG TCATCATCCG TCTGCAGAGA GGCCAAGAAA CGGCTTTCTG AAAGATGGGC ATTGATGGCA GCAGCCAATG AGAATTTGCA GGAGACCAAT GTTATCGAAA AGAAAGGCTC TAATAGTACC TTAGGTGATA TGCTTGCACT TCCAGATTTA AAAGACGATC TTAGAACCGA AGAAGAAAAA ACAAGCGATG GTAATGAACA GGAGGGTCCT AAAGTATCTG CATCTTGCTT TGATGGTAAT TTCAGTAGAG AAGAAGGAAA ATTAAAGCCT CCTAAAAGCC TTACACGATC GAAATCTCTC CCTGAATCAT CGACAAGTCT TGGTCACAAA TCCCTTGATA GTACCAAGAA GGGGAAATCC AAAGTTCCAG AGGAGCTGAC AAAGTCAAAG AGCTTGAAAT GGTCACTGAA AGGTAAAGTC TCAAACTTTC TTTTCTCAAG GAGCAAGAAA GCCAGTAAGG AGAGATCTTA TGAGGAATCC CAAATGGTAA ACCCCAAAAT CTTGGATTCT CGGTGTAACG ATGAATATGA TGCATCAGTG TCTGCCAGAA GCATGAATTC TCGGGAGGGA AGCTTATCAA TTGCAAAGCC GACCATTTTC GGAAACTCTA GCGAGTGGCG TGATGAGCCT AGTCCAATTT CGGTCCTGGA AACTTCATTT GATGAGGATG ATGGAATCTT TTTTAATTCC TCTATCTTGA ATAGATCATC ATCTTCTCTT GAACGGGAGA TGAAATCCAA CTTATTAGGA AAATCGCCTC CGATAGGGTC CATTGGTCGA ACCTTATCAT TCGATGACTC AACAGTTGCT CGGTGCTACT CATCTAAACG CTCTACTGCT TCCACAAGAG ACGAGGAAGA AGACTTGCGT CTCCTCATCA ACACACTCTT ATCAGCAGCT GATCTCGATT CAATCTCAGA CAATCTTTTA TCTAAATGGC ATTCTGCAGA GAGCCCACTA GACCCAACTC TGAGAAACAG CTACGCAGAC TCAACGGAAC AGAAAAGACT CGGATCAAAC GTTAAGAAGC TAGTGTTCGA CCTCGTCAAC ACGCTACTCT TGGAGCTAAC ACCGAGCTAT CTCGGACCTC GTAGTCCCTT GACACTCTCT GGTAAGCCAT TGCAAGTTTA TGTGATAAAC CGGATGCAAG AATGTTTAAC GGGTAACGGA AGAGTGGAAG ATCGGTGGTG GGATGAAGAC GGAGACTTGA GCAGTTTGGC GGTGAACAAA GTGGTGAGGA TTGAAGTAGC AGAGATTGGT TCGCAGGAGA GTTTGAGATT GGAAATGGAT TCCATGGGAG AGGAACTAGA GTTGAAATTG CTGGAGGAGT TAGTGGAGGA GGCTTTGATG GATTTGTCAG AACAATCCAA ATTATTTATT CCAAGTATTT GTTAATCATA TGGATGTATA TTATATGGTT TTATTGTGTG TATAAATATC TGGTGAATCA CACTTTCTTT CTATTTTGTT TTTTTTTTTG GGTGAATGAT AATGGAAAGT AGTGTTACAT ATATATACTA ATGTCTCAAG AATCAAGATT GTTCCAAAC 
Length2869
Protein Sequence
Protein Residue
Map Locationscaffold_8: 3623350.. 3627315
Download Sequence
A.thaliana
AGI-codeAT5G43880.1
DescriptionProtein of unknown function (DUF3741)
TAIR curator summary
Alias[TRM21][TON1 Recruiting Motif 21]
Gene coexpression
MR
MR Locus Description
3.60555 Ahg473885 Protein phosphatase 2C family protein
14.1421 Ahg913522 Patched family protein
16.4317 Ahg491750 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
17.8885 Ahg493274 COBRA-like protein-7 precursor
18.7083 Ahg486815 cyclin p1;1
20.3715 Ahg923876 tetratricopetide-repeat thioredoxin-like 1
20.6398 Ahg479268 receptor-like kinase 902
20.9762 Ahg326421 Exostosin family protein
21.587 Ahg478170 Leucine-rich repeat protein kinase family protein
21.9089 Ahg489836 Sec1/munc18-like (SM) proteins superfamily
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression