Detail


ID : Ahg326514

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|326514|fgenesh1_pm.C_scaffold_6001734
Sequence
ATGAACGGGA CATCGTCCGA GGAATCTTCC GATTCAACTC AGCGGATCGA TTCGTTCAAC GGCGAGCAGA GAGTCTACTT CGTCCCCTTG AGGTGGTGGA AAGATGCCCA AGATTCAATG CCTTCTGAAT CAGTTGAAAA AAGAGAAATC TTGTATACAG CAACAACTGG GTCGTCTTAT GGCGGCCCTA TGAAGTTGAT AAATAACATC TTTAACTCCG ATATTTTGTT CGATCTGAGG AGAGAAGGAG ATGCGTTACA GAATGGTGAA ACGGGAGAAG CAAGCGTCTC AGGCAGGGAC TTTGCTTTGG TCTCAATATC CAATCAAACT GATTCTTCTA TGGAATTTTT CTTATTATCT GTATCTTTTC ATTCTTTGGA GATCGAGTTT TTGAAGAAGA GGCTGAGGCA TCATGATGAT AAAAATACTG AGAGAGGTGT AAAAAGTTTC ACGGCTGGAG GAGTTGACAG AGGCGATGTT TATCCAGTAC AACTCAGGCT CTCCGTTTTG CAGGAAACCA ATTCATTGGC GGTTAAAATT TGCAAAAAGG ACAATTCAGT TGAATGTTTC AGAAGAGCAT GCAAGATATT CAGTTTGGAT TCTGAGCAGT TGCGCATTTG GGATATTTCT GGCCAAACAA CCTTGTTTTT CGAAAGTGAT GTGAGCAATT CCAAGGATTG TCAACAACAA GCAGATCAGG AAATGCTCCT AGAGCTGCAG ATTTATGGAT TATCAGACTC CATCAAATTG AAGGAATCGA AAAAGGAAGA TGGTTCCACA CAGCAAACCA ATGGGATTAC CAATGGCATA AATGGTGGCA CAGTGTTCAG ATTTGGACGG AGTAATTCTT TGAGCTTTTT GGGAAAAGCT GGAGAAGCTG GAACTTTGGG GTTGACAGGC TTGCAGAATC TAGGAAACAC TTGTTTCATG AACAGTTCCC TTCAGTGCTT GGCTCACACA CCAAAGCTTG TCGACTTCTT TCTTGGAGAG TACAGTAAAG AAATAAATCT TGACAACCCA TTGGGAATGA AAGGTGAGAT CGCCCTAGCT TTTGGTGACT TATTAAGGAG TCTGTGGGCT CCAGGTGCAT CAACAGTGGC CCCAAGGACA TTTAAAGCAA AACTTGCTCG CTTTGCTCCT CAGTTTAGTG GCTTTAATCA GCATGATTCG CAGGAACTTC TAGCTTTCTT GCTGGATGGA CTCCACGAGG ACTTAAACCG TGTAAGGAAC AAGCCTTACG TGGAAGCAAA AGATGGAGAT GGCCGTCCTG ACGCGGAAGT GGCTGATGAA TATTGGCGAA ATCATGTTGC TCGCAATGAT TCAATAATTG TTGATGTGTG CCAAGGCCAA TACAAGTCAA CATTAGTTTG CCCTATTTGC AAAAAAGTTT CTGTTATGTT TGATCCGTTC ATGTACCTAT CGCTACCTTT GCCATGCACA TCAATGCGAA CAATGGATTT AACAGTCATG AGTGCCGATG GGAGTAGTTT GCCTATTCCA TTGACTGTCA ATGTTCCTAA GTTTGGAAAA TTTGAAGATC TTCATAAGGC TCTTGTCACT GCCTGCTCTT TACCAGAGGA GGAAACTTTA CTGGTTACGG AGGTATACAA CAATCGGATT ATTCGCTTCC TGGAGGAGCC TACTGATTCA TTAACCTTGA TCAGAGATGG TGACAAACTT GTCGTGTATC GGATAAAGAA AGATGCAAAC AATTCTCCTT TGATTGTGTA TATGCATCAG AAGCTGGAAG AGCAGTTTAT ATCTGGGAAA TCTAGTCCAA CTTGGAAGGC ATTTGGAATC CCTTTGGTCT CGAGGCTTTG TGATGTTGAG AATGGATCTG ATCTCGAGAA CCTGTACCTG AAACTGCTTA GTTCATTTAA GATGCCTACT GAATTCTTCA CAGAGAATCT TGAAAATCGA ACTGAAGAAG AAGCCACTGA TAAAGCAGAT ACCGATGGTA CTACTTCAGT TGAGGATATA AATTCCACTG ATGTAAAGGA GACTACTGAA TCTCTTCCAG ATCCTGTGTT GAGGCTTTAC CTAACCGACG ACAGAGGAAA CTCAATAGAA TCTGAAATAT TGAAAGAGAA GCCTGTAAAT AAATCCAAGC GGGTGAATGT GCTTGCACGT TGGCCAGTAA AAGATCTTGA CGTTTATGAT ACTTGTCTTC TGAGCTCCTT ACCTGAGGTT TCCAAATTTG GAACTAAGAG ACCTCAAGAA TCCGTTTCGC TTTTCAAGTG CCTTGAAGCA TTCTTGACGG AGGAGCCTCT TGGTCCTGAT GACATGTGGT ATTGTCCTGG CTGCAAAGAG CACCGGCAAG CTATCAAAAA GTTAGATCTC TGGAGGTTGC CAGAGATCCT GGTCATTCAT CTGAAGAGGT TTTCGTATAG CCGGTTTATG AAGAACAAGC TGGAGGCCTA TGTGGACTTC CCGCTAGATG ATCTTGATCT ATCAAGCTAC ATCTCTTACA AGAATGGTCA GACAACATAT CGCTACATGC TCTACGCGAT TAGCAATCAC TATGGGAGCA TGGGAGGGGG TCATTACACT GCATATGTTC ACCATGGAGG TGATCGATGG TATGACTTTG ATGATAGCCA TGTCCACCCA ATCAGCCAAG AAAAGATCAA GACCTCGGCT GCTTACGTTC TGTTCTACAA ACGCCTTGTA GACTAA
Length2676
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8703268.. 8709556
Download Sequence
A.thaliana
AGI-codeAT5G22030.2
Descriptionubiquitin-specific protease 8
TAIR curator summary
Alias[UBP8][ubiquitin-specific protease 8]
Gene coexpression
MR
MR Locus Description
6.78233 Ahg472976 Syntaxin/t-SNARE family protein
8.48528 Ahg477830 acyl-CoA binding protein 4
14.4914 Ahg477743 RNA polymerase II transcription mediators
33.4066 Ahg490346 RELA/SPOT homolog 1
35.7771 Ahg493618 O-fucosyltransferase family protein
35.8748 Ahg472300 DNA-binding bromodomain-containing protein
39.7618 Ahg474438 Protein kinase superfamily protein
39.8246 Ahg899338 cytokinin oxidase/dehydrogenase 6
43.1277 Ahg481553 Aldolase superfamily protein
46.1844 Ahg915379
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression