Detail


ID : Ahg899338

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|899338|Al_scaffold_0005_3304
Sequence
ATGAGCTATC TCCTCAGGAA AAGAACCATG CTTATAGTAA GAAGCTTCAC CATCTTGCTT CTCAGCTGCA TAGCCTTTAA GCTGGCTTGC TGCTTCTCTA GCAGCATTTC TTCTTTGAAG GCGCTTCCCC TAGTTGGCCA CTTGGAGTTT GAAGATGTCC ATCACGCCTC CAAAGATTTT GGGAATCGAT ACCAGTTGAT TCCTTTGGCG GTCTTACATC CCAAATCGGT AAGCGACATC GCCTCAGCGA TACGACACAT CTGGATGATG GGCCCTCATT CACAGCTTAC GGTGGCAGCG AGAGGTCGTG GACATTCACT CCAAGGCCAA GCACAGACAA GACATGGAGT TGTTATACAC ATGGAATCAC TCCATCCCCA GAAGCTGCAA GTCTACAGTG TGGATGCTCC TGCTCCATAC GTTGATGTGT CTGGTGGTGA GCTGTGGATA AACATTTTGC ATGAGACCCT CAAGTACGGG CTTGCACCAA AATCATGGAC GGATTACCTA CATTTAACTG TAGGTGGTAC TCTGTCCAAT GCTGGAATCA GCGGCCAGGC ATTCCGACAT GGACCACAAA TCAGCAATGT TCATCAACTG GAGATTGTCA CAGGAAAAGG CGAGATCCTA AACTGTTCAA AGAGGCAGAA CAGCGACTTG TTTGATGGTG TTCTTGGTGG TTTAGGTCAG TTTGGCATCA TAACGCGGGC AAGAATAGCA TTGGAACCAG CACCAACCAT GGTAAAATGG ATAAGAGTGT TGTACCTGGA TTTTTCAGCT TTTGCCAAGG ACCAAGAGCA ACTAATATCT GCAGATAACA AATTCGATTA CATAGAAGGG TTTGTGATAA TAAACAGGAC AGGCCTCCTG AACAACTGGA GGTTATCCTT CACCCCGGAA GAGCCTTTAG AAGCAAGCCA ATTCAAATCT GATGGAAGGA CCCTGTATTG TCTGGAGCTA GCCAAGTACT TGAAGCAAGA TAACAAAGAT GTAATCAACC AGGAAGTGAA AGAAACGTTA TCAGAACTAA GCTACGTGTC GTCGACACTG TTTTCAACGG AGGTAACATA TGAAGCATTC TTGGACAGGG TACATGTGTC TGAGGTAAAA CTTCGATCGA AAGGGCAATG GGAGGTGCCA CATCCATGGC TGAACCTGCT GGTACCAAGA AGCACAATCA AAGAATTTGC AAAAGGTGTA TTCGGAAACA TACTAACGGA TACAAGCAAC GGCCCAGTCA TCGTATACCC AGTGAACAAA TCAAAGTGGG ACAACCAAAC ATCAGCAGTA ACACCGGAGG AAGAGGTATT CTATTTGGTG GCCATCCTGA CGTCGGCAGT CCCAGGGAAG GAGGATGGAG GAGGAGTAGA ACAGATATTG AAGCGGAACA GAAGAATACT GGAATTCAGT GAAGAAGCAG GGATAGGGTT GAAGCAGTAT CTGCCACATT ACACAACCAG AGAAGAGTGG AGATCCCATT TCGGGGCCAA GTGGGGAGAA TTCGTGAGGA GGAAATCGAG ATATGATCCA TTGGCAATAC TTGCGCCTGG CCAGAGAATT TTTGAAAAGG CTGTCTCATA CTCATGA
Length1587
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT3G63440.1
Descriptioncytokinin oxidase/dehydrogenase 6
TAIR curator summaryThis gene used to be called AtCKX7. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.
Alias[ATCKX6][ATCKX7][CKX6][CYTOKININ OXIDASE 6][cytokinin oxidase/dehydrogenase 6]
Gene coexpression
MR
MR Locus Description
5.09902 Ahg921837 plant U-box 45
30.3974 Ahg497434 PsbP-like protein 2
31.8904 Ahg919829 response regulator 4
32.0468 Ahg489514 iron-regulated protein 3
37.47 Ahg920964
39.8246 Ahg326514 ubiquitin-specific protease 8
40.9878 Ahg922594 myo-inositol monophosphatase like 1
41.4246 Ahg496062
45.4313 Ahg331490 Rubredoxin-like superfamily protein
51.4781 Ahg473996 conserved peptide upstream open reading frame 31
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression