Detail



ID : Ahg326933

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|326933|fgenesh1_pm.C_scaffold_6002153
Sequence
ATGCTTCCTC TATCGCTGCT TAAAACTGCT CAAGGTCATC CTATGCTCGT GGAGCTCAAG AATGGAGAGA CATACAATGG GCATTTGGTG AATTGTGATA CTTGGATGAA CATTCATCTT CGTGAAGTCA TCTGTACATC AAAGGACGGA GATAGGTTTT GGAGAATGCC GGAATGTTAT ATCCGTGGTA ACACAATCAA ATACCTTCGA GTTCCAGATG AGGTGATTGA TAAAGTACAG GAGGAGAAGA GTCGCACAGA TAGAAAACCA CCAGGGGTTG GACGGGGAAG AGGACGTGGT GTGGATGATG GAGGGGCCAG AGGCAGAGGC CGAGGAACTT CAATGGGTAA GATGGGTGGC AACAGAGGTA AAAATACACA GCCAAAATTT GTTATGACCA TATCCGTAGT TGTCTGCCAC AATTGGATTT AA 
Length432
Protein Sequence
Protein Residue
Map Locationscaffold_6: 11885431.. 11886687
Download Sequence
A.thaliana
AGI-codeAT5G27720.1
DescriptionSmall nuclear ribonucleoprotein family protein
TAIR curator summary
Alias[emb1644][LSM4][embryo defective 1644][SM-like protein 4]
Gene coexpression
MR
MR Locus Description
4 Ahg484365 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta
6 Ahg483034 Microsomal signal peptidase 25 kDa subunit (SPC25)
9.64365 Ahg481612
13.7477 Ahg923698 indole-3-acetic acid inducible 18
17.3205 Ahg328593 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
19.4422 Ahg492129 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
21.9089 Ahg937058
22.1359 Ahg940460
22.9783 Ahg950185 ATPase, V0 complex, subunit E
24.3311 Ahg942308 Ribosomal L18p/L5e family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression