Detail



ID : Ahg937058

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937058|scaffold_501249.1
Sequence
AAAACCCTAG ATCCACAACA ATGGTGGATG AGAAGAAATC GAAGCAGAGA CATCGAGTCA TGGTCTTTGA ATCTATGTAT CCCATCGTCG CTCTTATGCT TATACTCGTC GCTTGCGTCG AGCTTTGCGA TGCAGCTACT GTTGTCGATG TTTATCGTTT AATTCAGTAC GATATCTCCG GTGTTCCTTT TGGTTCTCGT TTCTCTTCTC TTAATCATCA TGCTGCTTCT CTTAGCTTCC AACGTGGTGC CGATCTATCT CGTTCTGTAC TTATACTTCC TCTTCGTGAG CTTGACATTG GTTTTGTTCA AGATTACATC TCGCAAAAGC AGTCGCTTGG TGGATTGTTG ATTTTGCTTC CTCAGACGTT TAGGCCTGGG AATGTTGGTG GTGGAAGTCT AAATTCTGAA AATGATGGGT TTAGGAAGTT ATTAGCTCAA CTTGAGAAGA TACTTGTTCA TGGAAACATA CCTTTTCCTG TGTACTTCGC GTTTGAGAAT GAAGAGACTG ATGCTATGTT GGCTGATGTA AAGAAAAATG ATGCACTTGG TCAGCAAGCT ACTGCTACTA CAGGCGGATA TAAGCTTGTG ATCTCTGTAT CAGAGCCTAA GAAAATTGCA TCTCCCATCA TCACAAACAT CAAGGGATGG CTACCCGGAT TAAGAGCAGA AGGAGATTCC AACCAGCTTC CAACAATTGC TGTAGTTGCA TCCTATGATA CCTTCGGAGC AGCTCCGGCA TTATCAGTTG GAAGTGACAG CAATGGAAGT GGGGTCGTGG CGCTTCTTGA AGTGGCTAGA CTATTTTCCG TTCTGTACTC AAATCCCAAG ACAAGAGGGA GATACAATTT ACTTTTTGCA CTAACATCTG GTGGACCCTA CAACTACGAA GGAACTCAAA AGTGGCTGAA GAGCCTTGAT CAGAGGATGC GTGAGAGCAT TGATTATGCC ATTTGCTTGA ACAGTGTTGG GTCTTGGGAC AGTGAACTAT TGATCCATGT GTCAAAGCCT CCAGATAACG CCTATATAAA GCAAATTTTT GAGGGCTTCT CTAACGTGGC AGAAGACTTG GGTTTTCAAG TTGCTCTGAA GCACAAGAAG ATTAATATCT CTAATTCACG AGTTGCTTGG GAGCATGAAC AGTTTTCAAG ACTCAGAGTA ACTGCAGCCA CAATATCTGA ACTTTCAACT CCACCCGAGT TACTGGAAAA TGCTGGAAGT CTGTCTGACA CAAGGCAATT GGTGAGTGAA GATGCTATCA TTAAGGGTGT CAAATTGGTG GCTGAAAGCC TTGCGAAACA TATCTATGGT CACCAAGGAA AAGACATCAA GATTTTTGCT GATGACAGTA GTTTGGCTGT AAATCCATTC TATGTGAGAT CATGGTTGGA TCTTTTGTCA CAAACTCCTC GGGTAGCACC GTTTCTCTCA AAGAACGAAC CATTAATCAT GGCTCTGAAA AAGGAACTAG AGGATTATAC TGCTGAAGTT AGTGTTCAAC ATGAATCTTT AGACGGAAGT TTCACCTTTT ACGACTCAAC AAAGGCTAGC CTTAATATAT ACCAGGTGGC GAGTGTAACC TTCGACTTGC TCTTGCTTCT GGTTCTAGGA TCATACTTGA TAGTGCTTTT CAGTTTCCTC GTCATCACAA CTCGGGGTCT GGATGACTTG ATAAGCTTAT TTCGCCGGCC TCCTTCCCGG AAAGTGAAAA TGGGATGATT TGCTTCCTTT CCGGTAACT 
Length1739
Protein Sequence
Protein Residue
Map Locationscaffold_5: 10343892.. 10348047
Download Sequence
A.thaliana
AGI-codeAT3G44330.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.2915 Ahg476156 equilibrative nucleotide transporter 1
7.54983 Ahg903252 FtsH extracellular protease family
9.16515 Ahg951066 1-deoxy-D-xylulose 5-phosphate reductoisomerase
12 Ahg948914 Proteasome component (PCI) domain protein
14.8997 Ahg489026 LA RNA-binding protein
16.2481 Ahg488158 no exine formation 1
16.2788 Ahg324617 embryo defective 1703
18.5472 Ahg479795 emp24/gp25L/p24 family/GOLD family protein
18.6548 Ahg938367 uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS)
19.0526 Ahg921266 cytochrome C oxidase 6B
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression