Detail



ID : Ahg484365

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484365|fgenesh2_kg.5__357__AT3G26030.1
Sequence
TGCCAACGAA GCAATAGCTA TGAAAAGCTA AACCCTTTCT TCTTCTTCTT CTTCTTCTTC TTCTTCAATT GTTTAGATCA CTTGGGTCAA ACCCAAGTCT GCTTCTTTCT ATGATTCATC AATCTAGATC TTCCTATCTG GGTCCAGAAA CGATTCACGC GCTTCGTTCA TGATATAAAG TTACTACCTT TTTCTTGCTT CTGGGTCATG GTTCTGTCTG CTTTTCGTCT TTTGCTTTTG TCTGGATGAT TCATTAATCT CTGAGATCTA GTATGTTCAC AAGAGTTGTT CTTATGCGTG GTGAGATGAT CTTAGGAGTA GTTCAGTATC TTTCTTCAAT TCGGATTTTG AGTTTCTGAG ATCTGTTTTT TTTGCTTAAA GAATCCGATC TGAGTTTGAG GAAGTTGACC AATATAGATC GAAGATGTTT AAGCAGATAC TTGGGAAGCT TCCTAAGAAA ACCTCTGCTA AGTTTTGGGA TAATGGTGAC TCCCAAACTC CAGATAACAA CAATCAAGGA GGTGATGAAG TTTTAAGCCA GAGATCATCA TCAAATGGAG ATACTTTGGA TTGTGTTTCT TTTGATGTAT TGCCAAGGTT GAGAGATGTT TCCATCTCTG AGAAGCAAGA ACTGTTTCTT AAGAAGCTTA GACTATGTTG TGTTGTGTTT GATTTTGTCG CCGAGCCTCA ACAGAACTTC AAGGAGAAAG AGATTAAAAG GCAAACACTT CTTGAAGTTG TGGATTATGT TATCTCTTCA GGGAATGGCA AGTTTCCTGA ATCAGTTATT CAAGAAGCTA CGAAGATGAT TTCGGCGAAT CTCTTTAGTA ATCCTCATCG ACAATGGAAG AACAAAACTC CTGAAGCATT GGATTTGGAA GAAGAAGAAG GATCTTTGAA TCCTTCTTGG CCTCACTTGC AGATTGTTTA TGAGTTCCTT CTAAGAATCG TCGCGTCTCC CAACACTGAC CCCAAGATAT CCAAGAAATA CATCGATCAT ACATTCGTTC TCAAGCTATT GGATTTGTTT GACTCTGAAG ATCCGAGGGA AAGAGAGTAT CTGAAAACGA TACTTCACCG GATCTACGGG AGGTTTATGG TTCATCGCCC GTTCATCAGG AAAACTATGA ACAACATCTT GTATGATTTT ATATTCGAGA CCGGGAAACA CTCAGGAATC GCCGAGTTTC TTGAAGTTTT AGGATCCATC ATCAATGGAT TCGCTTTACC ACTCAAGGAA GAACACAAGC TCTTCCTTAC TCGTGTCTTG ATTCCTCTAC ACAAACTGAA ATGCTTACCA AATTACCATC AGCAGCTTTC TTATTGCGTT ATACAGTTTG TTGAGAAAGA TTGTAAGCTC GCGGATACCG TTATTAGAGG GATGTTGAAG TACTGGCCTG TTACTAATAG CTCTAAAGAA ATCATGTTCT TGAATGAATT GGAGGAGATA TTAGAAGCAA CTCAATTAAC AGAGTTTGAA CGGTGTATGA TTCCGCTCTC TCGCCAAATT GCTCAGTGCT TAAGCAGTTC TCACTTTCAG GTAGCAGAAC GGGCTTTATA CTTATGGAAC AACGATCATG TCACTAATTT GGTGAGACAG AACAGTAGAA TCATTTTACC GATAGTGTTT CCCGCTTTGG AGAAAAACGG TAGCAGCCAT TGGAATCAGG CTGTGAAGAA CTTGACCGAG AATGTTCTCA AGGTTTTGTC GGATACAAAT CCAGATTTAT TCGAAGAATG TTTGCGCAAG TTCCAAGAAG ATCAGCAAAA AGCAGAAGAT ACTAAAAAGA AGAATGGAGA AACCTGGAAA CAGCTAGAGG AGATTGTTGC TTCAATGGCG AAGTAAGAGT TTTTCTGCAC TTTACGCGAT GCAACAAGAA TCGGTTTATT GTTTTGTTTT CTTTACGCCT GAAAGGTATA TACATTTACT TTGCTTTGAT TGCTTCAAGT CTCTGGTTTC GACTTCAAGA CTAGTTTAAT TCAGTTAAAC AGTGTGAGAT TTTACCTCTT TCAGTTCTTG ATTTGTCTGT ATACTTCGTT CATGTAAACA TCTTGTTATG AAAACACGAA TATTCTATTG TTTGAAGTCA CTTAGTTTAT AGGTGAAAGA GATGGCTCTA ATATTAAAAT T 
Length2131
Protein Sequence
Protein Residue
Map Locationscaffold_5: 2467445.. 2469678
Download Sequence
A.thaliana
AGI-codeAT3G26030.1
Descriptionserine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta
TAIR curator summaryprotein phosphatase 2A regulatory subunit isoform B' delta
Alias[ATB' DELTA][serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg477743 RNA polymerase II transcription mediators
4 Ahg326933 Small nuclear ribonucleoprotein family protein
4.58258 Ahg948853 squamosa promoter binding protein-like 2
5.65685 Ahg926502 ARM repeat superfamily protein
6.9282 Ahg945696 Protein kinase superfamily protein
10 Ahg485899 Sec1/munc18-like (SM) proteins superfamily
12.6491 Ahg933625 SHAGGY-related protein kinase dZeta
14.2829 Ahg922878 SEUSS transcriptional co-regulator
17.2337 Ahg931216 RING/U-box superfamily protein
18 Ahg913433 calcium-dependent protein kinase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression