Detail



ID : Ahg939957

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939957|scaffold_600501.1
Sequence
TCAAGTCTTT GTTTTAACCT ACAATGGCTT CAAATCAACT TACTGCCATT CTAGTTCTCG TACTTACACT TTTACTCCAA GGTAATAACA ATAACGTCGT CGAAGCACAA CTCACTACTA ATTTCTACTC AACCTCTTGC CCTAACCTCC TCTCCACCGT CCAAAGCGCC GTTAAATCTG CCGTTAACAG CGAGGCTCGA ATGGGTGCAT CTATCCTCCG TCTCTTCTTC CACGATTGCT TCGTCAACGG ATGTGACGGT TCGATTCTGT TAGATGACAC GTCGAGCTTC ACTGGAGAAC AAAACGCGGC TCCAAACCGC AATTCAGCTC GTGGGTTTAA TGTGATCGAC AACATCAAAT CAGCGGTTGA GAAAGCATGT CCCGGGGTTG TGTCTTGTGC TGATATCTTA GCCATTGCAG CTAGAGACTC CGTCGTAGTA CTTGGAGGGC CGAATTGGAA TGTGAAAGTA GGAAGAAGAG ATGCAAGAAC GGCGAGTCAA GCGGCAGCGA ATAGTAACAT TCCGGCGCCG ACTTCGAGTC TGAGCCAACT CATTAGTAGT TTCAGTGCTG TTGGACTCTC CACCAGAGAT ATGGTTGCTC TCTCCGGCGC ACACACGATC GGACAATCCC GTTGCACGAA CTTCCGAGCG AGAATCTACA ACGAGACAAA CATCAACGCC GCCTTCGCCA CCACACGTCA ACGAACTTGC CCTAGAGCCA CCGGTTCCGG CGACGGAAAC CTAGCTCCAC TAGACGTCAC CACGGCTGCC TCTTTCGACA ACAACTACTT CAAGAATCTC ATGACTCAGA GAGGTCTCCT CCATTCCGAC CAAGTGCTCT TCAACGGCGG CTCCACTGAC TCTATCGTCC GTGGATACAG CAACAATCCG TCGAGCTTTA ACTCCGACTT CGCGGCGGCG ATGATAAAAA TGGGTGATAT CAGCCCGTTG ACTGGTAGTA GCGGTGAGAT CCGCAAGGTT TGCGGGAGGA CCAACTGATT CAAATCTCCT CCACGTGTT 
Length1019
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1865234.. 1866957
Download Sequence
A.thaliana
AGI-codeAT5G05340.1
DescriptionPeroxidase superfamily protein
TAIR curator summary
Alias[PRX52][peroxidase 52]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg905294 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
2.82843 Ahg479778 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
4.24264 Ahg487770 hydroxyproline-rich glycoprotein family protein
6.9282 Ahg480719 Peroxidase superfamily protein
7 Ahg330958 FAD-binding Berberine family protein
12.4097 Ahg943161 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
13.0384 Ahg326972 peroxidase CB
13.4907 Ahg483261 Protein of unknown function, DUF642
13.7477 Ahg476851 extensin 4
14.0712 Ahg482955 ABC-2 type transporter family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression