Detail



ID : Ahg921768

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|921768|scaffold_103049.1
Sequence
CTCTCTCCTC TTGTTTGGGG CATGGAAGAA GAGCTTGCCA TGCTTAGACA GCTCATCGGT CAGCTTCAAG AGCTCTTGCA CAACGGCTCT CCTCCTCTTA CTTCTTCTTC TTATTCTTCT CCGTCGTTTT TAGTTCTCAA CCATCCTCAG TATCAGAACG GATGGTGTTT GCCCTGTATT GAGGAAACTT CTGCTGATGA TTGTTGTGAT ATTGTAATGG CTGCTGGAAA GAGGCCTGGG ATCTTCAAGA TGTTAGAAAC TGTCAAGCCT CCCGTCAAGC GAACTCGAAA AGACCGGAAT CAAGGGAAAT TATGTACAGA AGGAGATGAC ATAAGTGGAA ACATGGATCA AGAAATCTGG CAGGAATTTC CTCAAGATCT CTTTGAAGCT GTTGTTTCCA GGCTACCAAT TGCTACATTT TTCCAGTTCC GTGCAGTTTG CCGTAAATGG AATGCTCTTA TTGAGTCAGA TAGCTTCTCC AGATGCTTCA CTGAGCTTCC TCAGACCATC CCATGGTTCT ATACCATAAC CCACGAGAAT GTCAACTCGG GACAAGTGTA CGACCCTTCT TTGAAGAAAT GGCACCATCC AATTATCCCA GCACTACCCA AGAAGAGTAT TGTTTTGCCA ATGGCTTCTG CAGGAGGTCT AGTGTGCTTC CTCGACATTG GTCATAGGAA CTTCTATGTG AGCAACCCGC TGACCAAGTC TTTCAGAGAG TTGCCTGCTA GGTCGTTCAA GGTTTGGTCT CGTGTTGCAG TAGGAATGAC TCTGAATGGA AACTCCACCA GTCATGGGTA TAAGGTCTTG TGGGTTGGAT GTGAAGGAGA GTACGAAGTG TATGATTCCC TGAGTAATGT GTGGACCAAA CGAGGGACCA TCCCGTCCAA CATAAAGCTC CCGGTGTTGC TCAACTTTAA GTCACAGCCA GTGGCTATCC ACAGCACACT TTACTTCATG TTAACAGATC CCGAAGGGAT ATTGTCCTAT GACATGGTCT CTGGGAAGTG GAAGCAGTTC ATCATACCGG GCCCACCAGA CCTGAGCGAT CACACGCTGG CTGTGTGCGG AGAGCGATTG ATGCTGGTGG GTCTTCTGAC TAAAAACGCT GCCACTTGCG TTTGCATATG GGAGCTGCAG AAGATGACAC TGTTGTGGAA GGAGGTTGAC AGAATGCCAA ACATATGGTG CTTGGAGTTT TACGGAAAGC ACATTAGGAT GAATTGTCTG GGCAACAAAG GTTGTCTGAT ATTATTGTCC TTGAGGTCCA GACAGATGAA CCGTCTGATA ACCTACAATG CTGTTACAAG GGAATGGGCC AAGGTCCCTG GCTGCACCGT TCCTCGTGGG AGAAAAAGAC TTTGGATCGC TTGCGGAACA GCGTTTCATC CCTCCCCTAC AGCTAGGGCT TGATCATCTT TTCTCTTGGT TCA 
Length1433
Protein Sequence
Protein Residue
Map Locationscaffold_1: 11368922.. 11371117
Download Sequence
A.thaliana
AGI-codeAT1G27340.1
DescriptionGalactose oxidase/kelch repeat superfamily protein
TAIR curator summary
Alias[LCR][LEAF CURLING RESPONSIVENESS]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg327370 transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors
5.74456 Ahg475153 Chaperone DnaJ-domain superfamily protein
7 Ahg478093
8 Ahg936910 Pectin lyase-like superfamily protein
12.2474 Ahg323761 gamma response gene 1
14 Ahg473263 multidrug resistance-associated protein 1
16.6132 Ahg490600 MATE efflux family protein
16.9706 Ahg919332 Rho termination factor
17.6635 Ahg490568 ARM repeat superfamily protein
21.4476 Ahg478500 LETM1-like protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression