Detail



ID : Ahg327396

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|327396|fgenesh1_pm.C_scaffold_6002616
Sequence
ATGTTTCGTT TTCCGGTAAG TCTTGGAGGA GGTCCACGTG ACAATACGAA GCCGTTGGAT GAGCAGCATC ATCGGGCGGT GGTGGATGAG GTTGACTTTT TCCGATCGGC GGAGAAGAGA GATAGGGTTT CACGTGATGA TCAAGATATG ATCGCCGATC ATGAGACTCA TAGGGTTCAT GTCAAAAGGG AGAATTCACG TGTTGATGAT CATGAAGATC GTTCTACGGA TCATATCAAT ATTGGACTTA ATCTTCTCAC TGCGAATACG GGAAGCGACG AGTCAATGGT GGATGATGGA TTGTCTGTGG ATATGGAAGA GAAACGTACA AAGTGTGAGA ATGCGCAACT TCGAGAAGAG CTAAAGAAGG CGAGTGAAGA TAATCAAAGA CTAAAAGAAA TGCTAAGTCA AACAACCAAC AGCTTCAATT CCTTGCAGAT GCAACTTGTT ACTGTCATGA GGCAACAAGA AGATCATCAT CACCTGGCTA CAACTGAAAA CAAAGACAAC GCCACGAACC GACATGAAGT GCCTGAAATG GTTCCGAAAC AGTTCATCGA TTTGGGACCG CAGTCAGATG AAGTGTCATC CGAGGAGAGG ACGACGGTTC GGTCAGGATC TCCTCCATCG CTTCTAGAGA AATCTAGCTT ACGTCAAAAC GGAAAGAGAC TGCTTGTAAG AGAAGAAAGC CCAGAAACCG AATCCAACAG CTGGAGAAAC CCTAACAAAG TTCCTAAACA CCACGCATCC TCCAGCAATT GCGGTGGCAA TGGCAGTGAA AATGCAAGTA GCAAGGTCAT CGAGCAAGCG GCTGCGGAAG CCACCATGCG TAAAGCCCGT GTTTCGGTTC GTGCTCGATC CGAAGCTAAC ATGCTAAGCG ATGGATGTCA ATGGAGAAAA TACGGGCAGA AAATGGCGAA AGGAAACCCG TGCCCTCGAG CTTATTACCG TTGCACAATG GCCGTTGGAT GCCCCGTTCG CAAGCAAGTG CAACGTTGCG CGGAAGACAG AACCATTCTC ATAACAACCT ACGAAGGAAA CCATAACCAT CCATTACCTC CCGCGGCTAT GAACATGGCT TCAACCACAA CCGCAGCCGC AAGCATGCTC CTCTCAGGCT CCACAATGTC GAACCAAGAT GGTTTAATGA ACCCAACAAA TCTCTTGGCC CGAACCATCT TACCGTGTTC CTCAAGCATG GCCACTATCT CAGCCTCTGC ACCATTCCCA ACCATTACAT TAGACCTCAC AGACTCATCC AACGGTAACA ATCCAACTAA TAACCCGCTG ATGCAATTCT CTCAACGGTC TGGTTTCGCG GAGTTGAATC AATCGGTTTT GCCTCATATG ATGGGTCAGG CTTTGTACTA CAACCAACAG TCTAAGTTCT CGGGTTTACA TATGCCGTCT CAGCCTCTAA ACGCTGGCGA GAGCGTTAGC GCCGCTACTG CCGCCATCGC CTCCAACCCC AACTTTGCAG CGGCTCTAGC TGCAGCCATA ACTTCTATTA TCAACGGTTC GAATACTCAG CAGAATGGGA ACAACAATAA CAGTAATGTC ACCACGAGCA ACGTTGACAA TAGGCAATAA 
Length1590
Protein Sequence
Protein Residue
Map Locationscaffold_6: 21058108.. 21060801
Download Sequence
A.thaliana
AGI-codeAT4G04450.1
DescriptionWRKY family transcription factor
TAIR curator summarymember of WRKY Transcription Factor; Group II-b
Alias[AtWRKY42][WRKY42]
Gene coexpression
MR
MR Locus Description
3.74166 Ahg475495 Cytochrome P450 superfamily protein
7.81025 Ahg490342 sucrose synthase 3
8.24621 Ahg476902 amino acid permease 3
9.48683 Ahg491275
9.48683 Ahg494249 alpha/beta-Hydrolases superfamily protein
9.79796 Ahg934838 Integrase-type DNA-binding superfamily protein
11.6619 Ahg910866 Protein of unknown function (DUF707)
15.4919 Ahg476817 PLATZ transcription factor family protein
16.4317 Ahg486755 Adenine nucleotide alpha hydrolases-like superfamily protein
16.7332 Ahg343136 UDP-glycosyltransferase 73B4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression