Detail



ID : Ahg327754

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|327754|fgenesh1_pm.C_scaffold_6002974
Sequence
ATGACGACCG GAGATCTCGT GAATATCCAT CCTACTGAGC TTAAATTCCC TTTTGAGTTG AAGAAGCAGA GTTCGTGTTC GATGCAATTG ACCAACAAGA CAACTACTCA ATGTGTCGCT TTTAAGGTTA AAACTACCAA TCCTCGCAAA TACTGTGTCC GTCCTAACAC CGGTGTTGTC TTGCCTGGCG ATTCCTGCAA TGTTACAGAC AACTTAAACA ACAACACAAG TTTTCTTTCA GTGACTATGC AAGCCCAGAA AGAGGCTCCT CTTGATATGC AATGCAAAGA CAAGTTCCTT GTTCAGACTG TTGTTGTCTC TGATGGTACT ACTTCCAAAG AAGTGCTCGC TGAAATGTTC AACAAGGAGG CTGGTAGAGT GATTGAGGAT TTCAAATTGC GGGTTGTTTA CATCCCTGCT AATCCCCCTT CACCCGTCCC TGAAGGATCT GAAGAAGGCA ACTCTCCTAT GGCTTCCCTC AACGAGACTG GCTCTCAAAC TGCCTCACTA TTTGATGACG TGTCCAGAAC GTTTGAAGAA ACAAATGAGA AATCTTCAGA GGCGTGGTCT ATGATTTCCA AATTGACGGA GGAGAAGACT TTTGCTACTC AACAAAGTCA GAAGCTCCGA CTGGAACTGG AAATGCTGAG GAAAGAATCA AGCAAGAAGC AGTCAGGTGG TCATTCCTTG GTGTTGATGC TGCTCGTGGG TCTGCTCGGT TGTGTGATTG GCTACATATT GAACCGGATC AATAGTTTCA AAATAAACCT AATGGGTATC TCGAAAGCTT TGCGATCTCT TCTCATCTTG CTGCTCCTCA ACATGACATT CATCTTCGGT CACGTTATAC CAGGAGCCAC CGTCAAGCCA TGCCCTCCCT CTCCCACGAA ATGTCCAAGA GACACTCTCA AATTTGGAGT GTGTGGGAGC TGGTTAGGTC TGGTTCGTGA GGTCATCGGT ACACCACCGA GCCAGGAGTG TTGCTCACTC ATCAAAGGTT TGGCTGACTT TGAAGCTGCC GTTTGTCTGT GCACCGCCCT TAAAACCAGC ATTCTCGGAG TTGCTCCGGT CAAAATTCCC GTTGCTCTCA CTCTGCTTCT CAACTCTTGC GGCAAAAATG TTCCTCAGGG ATTCGTCTGC TAA 
Length1143
Protein Sequence
Protein Residue
Map Locationscaffold_6: 23438398.. 23441088
Download Sequence
A.thaliana
AGI-codeAT4G00170.1
DescriptionPlant VAMP (vesicle-associated membrane protein) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.6132 Ahg471443 glyceraldehyde 3-phosphate dehydrogenase A subunit 2
21.4009 Ahg477371 carbonic anhydrase 1
23.8118 Ahg945589 acyl carrier protein 4
34.5254 Ahg474689 Phosphoglycerate kinase family protein
39.3065 Ahg486137 dicarboxylate diiron protein, putative (Crd1)
42.3556 Ahg474626 photosystem I subunit G
44.0227 Ahg318010 FKBP-like peptidyl-prolyl cis-trans isomerase family protein
48.3529 Ahg951910 photosystem II subunit T
49.6991 Ahg492328 magnesium-protoporphyrin IX methyltransferase
50.9902 Ahg492755 photosystem II subunit QA
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression