Detail



ID : Ahg329260

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|329260|fgenesh1_pm.C_scaffold_7001487
Sequence
ATGGAGCGTC ACAGAAAACA CTCGGTCGGC GGCACAACCC TCCACAGGTG TCATCCCTGC CGGCGCGCCA TTCCATACAG AATCTACGCC GTAATCCACA CGTGTGGCAT CATAGCTCTC ATGTATCACC ATGTACACTC ACTTCTCACA GCAAACAACA CTCTAATAAC ATGTCTTCTC CTCCTCTCCG ATATTGTTCT CGCCTTCATG TGGGCAACCA CAACTTCCCT CCGGTTAAAC CCGGTTCATC GGACCGAGTA CCCTGAGAAA TATGCAGCTA AACCGGAGGA CTTTCCAAAG CTGGACGTGT TTATATGCAC GGCTGATCCG TACAAGGAGC CTCCGATGAT GGTGGTCAAC ACCGCCTTAT CAGTCATGGC TTACGAGTAT CCGTCCGATA AGATTTCAGT CTATGTATCG GACGATGGAG GATCTTCGTT GACTTTGTTT GCTCTTGTGG AGGCTGCTAA GTTCTCTAAG CATTGGTTGC CCTTTTGCAA GAAGAACAAT ATTGAAGATC GGTCCCCTGA AGTTTATTTC TCATCAAAGT CACATTCTCA GAGTGATGAA GCTGAAAATC TTAAGATGAT GTACAAAGAC ATGAAGAGTA GAGTAGAACA TGTGGTGGAG AGTGGAAAAG TTGAAACTTC GTTTATCACA TGCGATCAAT TTCGTGGGGT ATTCGATTTG TGGACAGACA AATTCACTCG TCATGACCAT CCCACAATTA TTCAGGTGCT ACAAAATAGC GAGACAGATA TGGACACTAC CAAAAAGTAT ATAATGCCAA ACCTAATATA TGTTTCAAGA GAGAAGAGTA AAGTTTCACC ACATCATTTC AAAGCCGGTG CTCTTAATAC TTTGCTACGA GTGTCTGGAG TCATGACGAA TGCACCGATT ATTTTAACAC TAGACTGTGA TATGTATTCG AACGATCCTG CAACACCAGT TCGTGCCTTG TGCTATTTAA CAGATCCTGA AATCAAAACT GGTTTAGGTT ATGTACAGTT TCCTCAAAAA TTTCAAGGAA TAAGCAAGAA TGATATCTAT GCATGCGCAT ATAAGCGTCT CTTTGAGATC AGTATGATAG GGTTTGATGG TCTAATGGGC CCAAATCATG TAGGAACTGG TTGTTTCTTC AATCGACGAG TTTTTTATGG GGCTCCGTCT AATTTGATTT TGCCTGAGAT AGATGAACTT AAGCCCAATC GTACTGTAGA TAAGCCCATC AACGCTCAAG ATGTTTTAGC ATTGGCACAC AAAGTAGCAG GCTGTATCTA CGAGCACAAC ACCAATTGGG GATCAAAGAT TGGACATAGA TACGGATCTT TAGTAGAAGA CTACTACACA GGGTATAGGC TCCATTGTGA AGGATGGAGA TCAGTTTTTT GCAGTCCCAA AAGAGCAGCA TTTTGCGGAG ATGCCCCAAA AAGCCTAATT GATGTAGTCA GCCAACAAAA AAGATGGGCC ATTGGGCTTC TTGAAGTTGC CTTCTCAAGG TATAGCCCCA TTACCTATGG TGTCAAATCA ATGGGTCTAT TAATGGGATT AGGCTATTGT CAATACGCAT GTTGGCCATT TTGGTCACTT CCTCATGTCG TCTATGGATT CTTGCCCCAA CTTGCTCTCC TCTATGGAGT TAGCGTCTTT CCCAAGTCAT CAGATCCATG GTTTTGGCTT TACATCGTTT TGTTCCTCGG TGCATATGCG CAAGATCTAC TCGACTTTGT ATTAGAAGGA GGAACTTATC GCGGATGGTG GAACGATCAA AGAATGTGGT CGATAAGAGG ATTCTCTTCA CACCTATTTG GCTTCATAGA GTTCACTCTT CAAACCCTAA ACCTCTCCAC ACATGGATTC AACGTCACAA GCAAAGCCAA CGATGATGAA GAACAGAGCA AGAGGTATGA GAAAGAGATG TTTGAGTTCG GTCCCTCTTC GACAATGTTC TTGCCTATGA CCACGACGGC GATAGTGAAC CTCCTTGCTT TTGTCTGGGG GCTTTATGGT CTTTTCGCTT GGGGAGAAGG ACTCGTCCTT GAGCTGATGC TAGCGAGCTT CGCGGTGGTG AATTGCTTGC CAATCTATGA GGCTATGGTG TTGAGGAAAG ATAATGGAAA ATTACCAAAA AGAATTTGTT TCGTAGCTGT GATCCTCACA TTTGTGCTGA TTGTGTCAGG TTACTTCTTC CTCAAGTAA 
Length2199
Protein Sequence
Protein Residue
Map Locationscaffold_7: 7267997.. 7271879
Download Sequence
A.thaliana
AGI-codeAT4G23990.1
Descriptioncellulose synthase like G3
TAIR curator summaryencodes a protein similar to cellulose synthase
Alias[ATCSLG3][CSLG3][ARABIDOPSIS THALIANA CELLULOSE SYNTHASE-LIKE G3][cellulose synthase like G3]
Gene coexpression
MR
MR Locus Description
3.60555 Ahg472189 Sec14p-like phosphatidylinositol transfer family protein
4.47214 Ahg943195 fibrillin
5.47723 Ahg494620 RmlC-like cupins superfamily protein
9.16515 Ahg490014 PGR5-like B
10.0995 Ahg948884
10.6771 Ahg941626 Protein of unknown function (DUF581)
16.7033 Ahg496771 MATE efflux family protein
17.7764 Ahg496002 Undecaprenyl pyrophosphate synthetase family protein
18.5742 Ahg490638 rotamase CYP 1
22.0454 Ahg495876 Fatty acid hydroxylase superfamily
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression