Detail



ID : Ahg496771

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496771|fgenesh2_kg.8__2587__AT5G65380.1
Sequence
TCTCTCGTCT TCACCATTCT TCTCACTGCT TCTTTTCTCC TTATATTTCA TTTCGTCCAC ATAACTAAAA AAAAGGAATT AGCGATGAGA GGAAGTGGCG GAGAAGAAGG ATCGGAGTCG AGAGTTGCAC TGTTGAAAAG TCCTCACACG GGGGAAGAAG ACGGTGAAGG ATTGAAGAAT AGAATTTTGG TTGAGACAAA AAAGCTATGG CAAATCGTTG GTCCGGCCAT ATTCAGTCGA ATTACGACAT ATTCGATGCT TATCATCACT CAAGCTTTCG CTGGTCATCT CGGCGATCTC GAACTCGCCG CCATCTCCAT CGTTAATAAC GTCACCGTTG GCTTCAACTT TGGCCTCTTG CTTGGAATGG CGAGCGCGTT GGAAACGCTG TGTGGGCAAG CGTTTGGAGC GAAGAAATAT TATATGTTGG GAGTTTATAT GCAGCGTTCT TGGATTGTTC TCTTCTTTTG TTGTGTCTTG TTATTACCAA CTTATATTTT CACTACTCCA GTTCTCAAAT TTCTTGGTCA ACCGGACGAT ATCGCTGAGC TTTCCGGTGT TGTCGCCATT TGGGTCATAC CTCTTCATTT CGCCTTCACT TTCTCTTTTC CCCTTCAACG TTTCCTCCAG TGCCAGCTCA AAAACCAAGT GACTGCGTAT GCCGCAGCCG TTGCATTGGT AGTTCACATT TTAGTGTGTT GGTTGTTCGT GGACGGACTT AAACTAGGAG TCGTCGGGAC TGTGGCTACG ATTAGTATCT CGTGGTGGGT CAATGTTCTT ATTCTATTGG TTTACTCTAC TTGTGGCGGT TGTCCACTTA CTTGGACCGG CCTCTCCTCT GAAGCCTTAA CCGGACTTTG GGAATTCCTT AAACTCTCTG CTTCTTCCGG CGTCATGCTT TGTTTGGAGA ATTGGTATTA TCGGATTTTG ATTATAATGA CTGGGAATCT TCAGAATGCT CGCATCGCCG TTGACTCCTT GTCCATATGC ATGGCGATAA ATGGTTGGGA GATGATGATA CCTCTCGCTT TCTTCGCCGG AACCGGTGTT CGTGTGGCGA ACGAATTAGG AGCTGGTAAT GGCAAAGGAG CAAGATTTGC GACGATTGTA TCAGTAACAC AATCGTTGAT AATCGGATTG TTTTTCGGGG TGCTAATAAT GCTTCTCCAT ACCCAAATCG CATGGATCTT CTCTTCGAGT GTAGCCGTCT TAGACGCCGT TAATAAACTT TCACTTCTGT TAGCTTTCAC CGTTCTTCTT AACAGCGTTC AACCGGTTCT TTCCGGTGTG GCGGTTGGAT CGGGTTGGCA ATCGTATGTG GCATATATAA ACTTGGGATG TTACTATTGC ATTGGTGTTC CACTTGGGTT TCTCATGGGC TGGGGTTTTA AACTCGGTGT CATGGGAATT TGGGCTGGTA TGATTTTTGG AGGAACCGCT GTTCAAACAA TGATCTTAGC TTTTATTACA ATGAGATGTG ATTGGGAAAA AGAGGCGCAG AAAGCAAGTG CTCGTGTTAA CAAATGGTCC AACACAATAA AATGATTCAA GATTTTGTTG AGTCAACTAT TAAATAATTT TGCAGCATAA TTTTGTTTTG GAAAACTGGT GTATGCTTGT ATCGAAATGT GATACAATAT CTTAGAGCCG GTTTATAGAT TAAATATGGT CTCTGTAAAC TGCAATTACT GCAACATGGC CTTTGTGATT TTCTTTTTAT AGCATGCCTT GTAATATTAT TAG 
Length1743
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20578820.. 20582437
Download Sequence
A.thaliana
AGI-codeAT5G65380.1
DescriptionMATE efflux family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.245 Ahg475854 aldehyde dehydrogenase 3H1
10.0995 Ahg493199 acyl-CoA oxidase 1
12 Ahg922711 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
16.7033 Ahg329260 cellulose synthase like G3
17.6635 Ahg479179 sequence-specific DNA binding transcription factors
21.2132 Ahg927863 cytochrome P450, family 87, subfamily A, polypeptide 9
21.7945 Ahg948265 Basic helix-loop-helix (bHLH) DNA-binding family protein
22.6274 Ahg478478 protein phosphatase 2CA
24.7992 Ahg897457 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
29.8998 Ahg496172 aleurain-like protease
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression