| Annotation |
|---|
| Description | jgi|Araly1|490014|fgenesh2_kg.6__3148__AT4G11960.1 |
| Sequence |
AATCATCACC ATCTCAATTC TCAACCACAC AAATCCAAAG CTTCTAACTT TTTTTTTTCT TCTTCTTCCC AGACAACGAT CTCACTCAAT CATCAAAAAC GATGGCCTTT ACTCTAACAA TCCCCCGGCT TTCTACAATT TCTCGCAAAC CCATCACTTG TTCTTCTTCG AAGACTGCTC ACTTTACTCA TGGACGATCG ATTTCTCTCA GAAGAAGACT TCTCTTATTG CCCCTTCAAG CTTCTACTGA TCAATCAGGT CAGGTTGGTG GGGAAGAAGT TGATGGCAAG ATTTTGCCAT ATTGTAGCAT CAACAAGAGT GAGAAGAGAA CAATCGGAGA AATGGAACAA GAGTTTCTCC AAGCCATGCA ATCGTTCTAT TACGAAGGCA AAGCGATTAT GTCTAATGAA GAGTTTGATA ACCTTAAAGA AGAGTTGATG TGGGAAGGAA GCAGTGTTGT TATGCTAAGT TCTGATGAAC AAAGATTTCT TGAAGCTTCA ATGGCTTATG TCTCTGGAAA CCCAATCTTG AGTGATGAAG AGTATGATAA GCTCAAATTG AAACTAAAGA TGGACGGAAG TGAGATTGTG TGTGAGGGTC CAAGATGCAG TCTTCGTAGT AAAAAGGTTT ACAGTGATCT TGCCATTGAT TACTTCAAAA TGTTCTTGTT GAATGTACCT GCAACTGTTG TTGCTCTCGG ACTATTTTTC TTCCTTGATG ACATTACGGG TTTTGAAATC ACGTACCTGC TCGAGCTTCC GGAACCATTC AGTTTCATTT TCACATGGTT TGCTGCGGTG CCTGCAATTG TCTATCTGGC GCTATCACTC ACCAAACTCA TCCTCAAAGA CTTCTTGATC TTGAAGGGCC CTTGTCCAAA CTGTGGAACA GAGAATGTAT CCTTCTTTGG AACAATACTT TCCATCTCCA ATGATGGTAA CACCAACAAT GTCAAATGCT CTGGCTGTGG AACGGAGATG ATCTATGACT CAGGTTCTCG TTTGATCACA TTACCAGAAG GAGGCAAAGC TTAAAACCTA TGAGCCAAGG CAAATGTGGA AATGTATGTT AAATGATACT AACAGATGAA TAAGGTGGAG AAATTAAAGA AAAAGAAGAA TATCAAAAGA GTTTGTTTGT GTTCTGTTTT GTATAAT |
| Length | 1157 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 20412858.. 20415216 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G11960.1 |
| Description | PGR5-like B |
| TAIR curator summary | Encodes PGRL1B, a transmembrane protein present in thylakoids. PGRL1B has a highly homologous isoform PGRL1A encoded by At4g22890. Plants lacking PGRL1 show perturbation of cyclic electron flow, similar to PGR5-deficient plants. PGRL1 and PGR5 interact physically and associate with PSI (photosystem I). |
| Alias | [PGRL1B][PGR5-like B] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.78233 |
Ahg496002 | Undecaprenyl pyrophosphate synthetase family protein |
| 7.4162 |
Ahg488996 | jasmonate-zim-domain protein 12 |
| 9.16515 |
Ahg329260 | cellulose synthase like G3 |
| 11.9164 |
Ahg495334 | heat shock protein 90.1 |
| 13.4164 |
Ahg472406 | DPP6 N-terminal domain-like protein |
| 13.7477 |
Ahg476975 | related to AP2 4 |
| 16.7332 |
Ahg479508 | |
| 16.9115 |
Ahg948136 | nuclear factor Y, subunit B2 |
| 16.9706 |
Ahg474229 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 18.2209 |
Ahg950808 | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|