| Annotation |
|---|
| Description | jgi|Araly1|329707|fgenesh1_pm.C_scaffold_7001934 |
| Sequence |
ATGCCAATCT CTAGTACTAG AAACTTCTTC AAACGATTCT GCGTCGAAGA ATACAATATG GATACATTCA AACACAGTAG TTTCCTCTCT GCTGATCTCT TACCATCTCT TGGAGCTAGA ATAAACCAAT CAACTAAGCT CCGCAAACAC ATCATCTCTC CTTTCGATCC ACGTTTCAGG GCATGGGAGA TGTGGCTGGT CATTCTTGTG ATTTACTCGG CTTGGATTTG TCCTTTTGAG TTTGCCTTCA TCACCTACAA GAAAGACGCG CTTTTCATCA TTGACAACAT TGTCAATGGC TTCTTTGCCA TTGATATCAT TCTCACCTTC TTCGTTGCTT ATCTTGACAG CCACTCTTAT CTTCTAGTCG ATAAACCTAA GAAAATAGCT ATAAGGTACC TTTCTACTTG GTTCGCCTTT GATGTCTGCT CAACAGCTCC ATTCCAGTCA CTGAGTCTTC TGTTCAATTA CAACGGAAGC GAAATAGGAT TCAGAGTTCT TAGTATGCTC AGGCTCTGGC GTCTTAGACG AGTTAGCTCC CTGTTTGCAA GGCTTGAGAA AGATATCCGC TTCAACTATT TCTGGACACG CTGCACAAAA CTCATTTCGG TCACACTGTT TGCAGTACAT TGTGCTGGAT GCTTCAACTA CCTCATTGCA GATCGATATC CTGATCCAAC AAAAACATGG ATTGGAGCTG TCTACCCAAA TTTCAAGGAG ACAAGCGTAT GGAGTAGATA TGTTACTGCT CTTTACTGGT CAATTACGAC ATTAACAACT ACAGGTTATG GAGACTTACA TGCCGAGAAT CCAAGAGAAA TGTTGTTCTT TGTGTTTTTC ATGCTCTTCA ACCTGGGTTT TACATCTTAC CTGATTGGAA ATATGACCAA CCTTGTGGTT CACTGGACTA GCCGCACCAG AAACTTTAGA GATACTGTAA GAGTTGCTTC GGAGTTTGCA TCAAGAAACC AACTTCCACC AAACATACAA GACCAAATGT TATCACACAT TTGCTTAAAG TTCAAAACAG AGGGTCTGAA ACAACAAGAA ACCTTGAACG GTTTGCCGAA AGCAATTCGG TCAAGCATTG CAAACTATCT CTTCTTCCCA ATCGTTCAGA ACGTCTACCT CTTTCAGGGA GTTTCTCACA ACTTCCTATT TCAGTTGGTT TCAGATATAG ACGCCGAATA TTTCCCACCA AGAGAAGATG TAATACTACA GAACGAAGCT CCTACTGACC TTTACGTTCT AGTCTCAGGG GCAGTGGATT TTACTGTCTA TGTTGGCGAA GAAGATCAGG TTCAAGGCAA GGCGGTTGTT GGCGATGCAT TTGGAGAGAT TGGTGTGTTA TGCTATACAC CACAACCTTT CACAGTTAGG ACAACTGAAC TTTCTCAGAT ACTACGCATA AGCAAGAAAT CTCTAATGAG TGCTATGCGA GCTCATATCG AAGATGGACG TGTCATAATG AACAACCTCT TCATGAAACT TAGAGGGCAA CAGTCAATAG CAATTGATGA TCCAAATACA GAAGCAGACT CACTTCTCCA GGAGTGGCTT GGTGGTGATC CAAAGACAGA AGAAGGAAAC ACAAGTGATC AAGGACAGGG ACACAAATAT TTACAACTGC ATGATACAAA AAATATTGAT ATGGGGTCAA CTGAATGGAG GGATTCAAGA TCTGGTTACG GTGAAACGAA AAGAGCTCTA GTACATAGGA TAGAGATAGA AGAAGGGTTA AAACCAAAGA AAGAATTTGA TGGAAAGGGT TGCTCTAATG CAGATCTTAC CTCATTTGAA TTTCATTCAC AGGAAGCATA TCCATATTGC AGATCAAACA TCCAAATCAA ACAACATGAA GCTGTAAAAC CAAAAGATAA GAGACTCACC ATCCACTTGA AGTCTCGGGA AAAAGATTTG TCGAAGCTGA TAGTACTTCC TGCTTCCATA GAAGAGCTGC TAAAACTTGC AGGTGACAAA TTTGGATACA AAAGCTTCAC AAAGGTCAAG AATGCGGAAA ACGCAGAAAT AGATGATGTA GATGTGATTA GAGATGGTGA TCATTTGTAT TTTTGCATCA ATGAGTACGA AGCTATAAAC TCCTAA |
| Length | 2106 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 10223027.. 10226104 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G18290.1 |
| Description | potassium channel in Arabidopsis thaliana 2 |
| TAIR curator summary | Encodes KAT2, a member of the Shaker family potassium ion (K+) channel. Critical to stomatal opening induced by blue light. Critical to circadian rhythm of stomatal opening. Involved in plant development in response to high light intensity. Under high light intensity, the mutant plant produced less biomass compared to the wild type. The Shaker family K+ ion channels include five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). |
| Alias | [KAT2][potassium channel in Arabidopsis thaliana 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.27362 |
Ahg942985 | Papain family cysteine protease |
| 19.1311 |
Ahg474144 | D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein |
| 19.5959 |
Ahg475666 | Lateral organ boundaries (LOB) domain family protein |
| 27.9285 |
Ahg478179 | lipid transfer protein 6 |
| 29.3939 |
Ahg945123 | Putative membrane lipoprotein |
| 38.5746 |
Ahg905145 | 4-coumarate:CoA ligase 2 |
| 38.8458 |
Ahg471298 | cytochrome P450, family 77, subfamily B, polypeptide 1 |
| 51.7687 |
Ahg318143 | Disease resistance-responsive (dirigent-like protein) family protein |
| 54.6717 |
Ahg330654 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 54.9909 |
Ahg914486 | Legume lectin family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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