Detail



ID : Ahg330174

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|330174|fgenesh1_pm.C_scaffold_7002401
Sequence
ATGATTGAAC AACCGGGAAC AATTTACTTA CGATACTTAG TTGACATTCA TAAAAAGTAT CTAATGAATT ATGAGTTCAA TACATCCTGT TTAGCAGAAA GACGGATATT CCTTGCTCAT TATCAGACAA TCACTTATTC ACAAACTTCG TGTGGGGCTA ATAGTTTTCA TTTCCCGTCT CATGGAAAAC CCTTTTCGCT CCGCTTAGCC CTATCCCCCT CTAGGAGTAT TTTAGTGATA GGTTCTATAG GAACTGGACG ATCCTATTTG GTCAAATACC TAGCGACAAA CTCCTATGTT CCTTTCATTA CAGTATTTCT GAACAAGTTC CTGGATAACA AGCCGAAAGG TTTTTTTATT GATGATATCG ATATTGATGA TAGTGACGAT ATTGATGCTA GTAACGATAT TGATCGTGAA CTTGATACGG AGCTGGAGCT TCTAACTATG ATGAATGCGC TAACTATGGA TATGATGTCG GAAATAGACC GATTTTATAT CACCCTTCAA TTCGAATTAG CAAAAGCAAT GTCTCCTTGC ATAATATGGA TTCCAAACAT TCATGATCTT GATGTGAATG AGTCGAGTTA CTTAGCCCTC GGTCTATTGG TGAACTCTCT CTCCAGGGAT TATGAAAGAT GTTCCACTAG AAATATTCTT GTTATTGCTT CGACTCATAT TCCCCAAAAA GTGGATCCCG CTCTAATAGC CCCGAATAAA TTAAATACAT GCATTAAAAT ACGAAGGCTT CTTATTCCAC AACAACGAAA GCACTTTTTC ACTCTTTCCT ATACTAGGGG ATTTCACTTG GAAAAGAAAA TGTTCCATAC TAATGGATTC GAGTCTATAA CCATGGGTTC CAGTGCACGA GATCTTGTAG CACTTACCAA TGAGGCCCTA TCAATTAGTA TTACACAGAA GAAATCAATT ATAGACACTA ATACAATTAG ATCTGCTCTT CATAGACAAA CTTGGGATTT GCGATCCCAG AAGAAATCAT GTAACGAAGG GGATTCTTAT TTGTACAAAT GGTACTTCGA GCTTGGAACG AGCATGAAGA CATTCACGAT ACTTCTTTAT CTTTTGAGTT GTTCTTCCGG ATCGGTCGCT CAAGACCTTT GGTCTCTACC CGTACCCGAT GAAAAAAATA GGATCACTTC TTATGGATTC GTTGAGAATG ATTCGGATCT AGTTCATGGC CTATTAGAAG TGCAAGGCGC TTTGGTGGGA TCCTCACGGA CAGAAAAAGA TTGCAGTCAG TTTGATAATG ATCGAGTGAC ATTGCTTTTT CGCTCCGAAC CAAGGGATCC CTTATATATG ATGCAAGATG GATCTTGTTC TATCGTTGAT CAGAGATTTC TCTATGAAAA ATACGAATCG GAGTTTGAAG AAGGGGAAGG AGAAGGAGTC CTCGACCCGC AACAGATAGA GGAGGATTTA TTCAATCACA TAGTTTGGGC TCCTAGAATA TGGCGCCCTC GGGGCTTTCT ATTTGATTGT ATCGAAAGGC CTAATGAATT GGGATTTCCC TATTCGGCCG GGTCATTTCG GGGCAAGCGG ATCATTTATG ATGAAAAGTA TGAGCTTCAA GAGAATGATT CGGAGTTCTT GCAGAGCGGA ACCATGCAGT ACCAGAGACG AGATAGGTCT TCCAAAGAAC AAGGCTTTTT TAGAATAAGC CAATTCATTT GGGACCCCGC AGATCCACTC TTTTTCCTAT TCAAAGATCA ACCCTTTGTC TCTGTGTTTT CACATCGAGA ATTCTTTGCA GATGAAGAGA TGTCAAAGGG GCTTCTTACT TCCCAAACGG ATCCTCCTAC ATCTATATAT AAACGCTGGT TTATCAAGAA TACGCAAGAA AAGCACTTCG AATTGTTGAT TCAGCGCCAG AGATGGCTTA GAACCAATAG TTCATTATCT AATGGATTTT TCCGTTCTAA TACTCGATCC GAGAGTTATC AGTATTTATC AAATCTGTTC CTATCTAATG GAACGCTATT GGATCGAATG ACAAAGACAT TGTTGAAAAA AAGATGGCTT TTCTCGGATG AAATGAAAAT AGGATTCATG TAA 
Length2073
Protein Sequence
Protein Residue
Map Locationscaffold_7: 17137026.. 17139144
Download Sequence
A.thaliana
AGI-codeATCG01280.1
DescriptionChloroplast Ycf2;ATPase, AAA type, core
TAIR curator summaryhypothetical protein
Alias[YCF2.2]
Gene coexpression
MR
MR Locus Description
44.2832 Ahg493180 arabinogalactan-protein family
60.3324 Ahg486548 Transketolase
74.6592 Ahg491653 fatty acid desaturase 6
75.2596 Virus0714
96.7213 Ahg945228 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression