| Annotation |
|---|
| Description | jgi|Araly1|945228|scaffold_701457.1 |
| Sequence |
TAAGTTTTCT GTGAATTTGT AATGGCTCCT AAAGCTGGGA AAACAAAGCC ACACAAGAGT AAAGGAGAGA AGAAGAAGAA GGAAGAGAAA GTTTTGCCCA CTGTCATTGA GATAAGTGTT GAAACACCAG ACGAATCCCA AGTGACACTC AAGGGTATCT CCACAGACAG AATCTTAGAT GTAAGGAAGC TCTTGGCGGT CCATGTTCAG ACATGCCACT TCACCAACTT CTCTCTCTCT CACCAGGTGC GTGGCACTAG ACTCAAGGAT TCCGTTGACA TCGTATCGCT CAAGCCTTGC CACCTCACCA TCGTCGAAGA GGATTATACG GAGGAGCAAG CCACCGCGCA CATACGGCGG CTCCTCGATA TCGTCGCTTG CACCACCGCA TTCGGTCCGT CGAAACCGCC GGTGTCTCGC ACGCCTCCTA AGGATTCTGA AAAGAAGGAG TCAGGCTCGA CGGATGGAGA TTCTCCGGCC GAAAAGGATG CCGGTGATTC AAATTCCGGT CTCAGCCCTA AATCTAAGGA ATCAGAGAGG AAATCCGTCG GCGGATGTGA GGCTCAGTCG GTGGAAGGAG CGGCTAAGAG TGACATCGAC ATGTGCCCAC CGACTCGTCT CGGACAATTT TACGAATTTT TCTCCTTCTC CTACCTTACT CCTCCAATTC AATATATCAG AAGGTCTGTT CGTCCATCTA AAGATGATAA AGGATTAGAT GATTTGTTTC AAGTCGATAT TAAAGTTTCA AGTGGGAAGC CATTCACGGT TGTTGCTTCA AGAACAGGTT TTTATCCAGC TGGGAAACAG CAGCTTCTGT GTCACTCTTT GGTTGAGTTG CTGCAACAGA TAAGCCGGCC TTTTGATGCG GCTTATGATG CTCTTATGAA AGCTTTCATT GAGCACAATA AGTTTGGCAA CCTTCCTTAT GGTTTCCGGG CAAACACTTG GGTAGTTCCT CCCGTTGTTG CAGATAGTCC ATCTACTTTT CCGTCACTTC CAGTGGAGGA TGAGACATGG GGAGGGGATG GTGGTGGGGT TGGCCGGTCT GGGAAGTATG ACCAAAGAAA GTGGGCAAAG GAATTTGCGA TTTTGGCTGC AATGCCTTGT AAAACACCTG AAGAGAGACA GGTTCGAGAT AGGAAGGCCT TCCTACTCCA CAGTTTATTT GTCGACGTTT CAGTTTTCAA AGCAGTGGAA ATAATAAAAA ATGTAGTAGA GAGTAATCAA CGCTCACCAA AGGATCCTGC TGCATTGGGT TTCCAAGAAG AAAGAATAGG TGATTTGATC ATAAGGGTGG CTAGAGATGA TCCTGACGCC AGTGCCAAGC TTGACCGAAA GAGTGATGGG ATCCAGGTTC TAGAGATCTC TCAGGAAGAG CTTGCTCAAA GGAATTTGCT TAAAGGGATC ACTGCTGATG AGAGTGCGAC AGTTCATGAT ACTTCTACCT TGGGGGTGGT GGTTGTAAGG CATTGTGGTT TTACAGCCAT TGTAAAGGTT GCTCCTGAAT TTAAGTTAAA TGATGGCCAG ATCCTACAGG ATATTGACAT TGAAGAGCAA TCCGAAGGAG GTGCAAATGC ACTGAATGTA AATAGCTTGA GAAGTCTATT GCACAAGTCG TCAACACCTT CTAGCTTAGC TCAGAGATCA CCAAATGCAG ACTCGGAACA AATACGTGTG GCTAAGTCTC TTGTGAGGAA AGTAATCGAG GATAGTTTAA AGAAATTGGA GATTGAGCCC TCAAGAAACG CTAAGCCTAT AAGGTGGGAA TTAGGAGCTT GTTGGGTGCA ACATCTACAA AATCAAGCTT CAAGTAAAAG TGAGTCTAAG AAAACTGAAG ATGCTAAGCC TGAACCAGCT GTTAAGGGTC TTGGAAAGCA AGGTGCACTG CTGAAGGAGA TAAAAAGGAA GATCGATGTG AAAGCTAACA AGACTGAACA GGGCAAAGAG GCCCTTGCTA ATGACACTGA CAATAAATCA GAAACTGAGG ATCAGAAGGA ACTCGAGAAA CATAACGAGG AAATGGAAAA GATGTGGAAA GAACTGGTGA CAGAAACTGC ATATCAGCGC CTTAAAGAAT CAGAAACTGG TTTCCATCTC AAGTCACCCA AAGAGCTGAT TGAAATGGCC CGCAAATACT ACACTGACAC TGCTCTTCCA AAACTGGTCA TTCCTCATAA ATTCAGACTT AATTTGTTGC AGGTGGCAGA CTTTGGATCT CTTGAACTCT CACCCGTCGA TGGAAGAACT CTTACAGACT TTATGCACAC CAGAGGCTTG CAAATGCATT CCTTGGGGAG AGTGGTCGAG CTGGCTGAAA AGCTCCCTCA TGTGCAATCC CTCTGTGTTC ATGAAATGGT TGTTCGGGCA TACAAGCATA TACTGCAGGC TGTTGTTGCA GCTGTTGAAA ACACCGCTGA TGTGGCCACC TCAATAGCAA CATGCTTAAA TGTCCTATTG GGAACACCGT CTGACACTGA TAGTGTATAC GATGAAAAGA TCAAGTGGAC CTGGGTGGAA ACGTTCATTT CCAAGAGGTT TGGGTGGGAC TGGAAGCATG AAGGCTGCCA GGAACTGAGA AAATTCGCCA TTCTTAGAGG ACTGTCACAC AAGGTTGGAC TGGAGCTTGT TCCTAAAGAC TATGAGATGG ACACTTCATA TCCTTTTAAG AAGTTTGATA TTATCAGTAT GGTTCCTGTG TATAAGCACG TAGCATGTTC ATCTGCTGAT GGACGCACTT TGTTGGAATC ATCCAAAACC TCCTTAGATA AAGGAAAACT GGAGGATGCT GTCAATTATG GCACCAAGGC ATTGGCGAAG CTTGTAGCAG TGTGCGGCCC ATATCATCGA ATGACCGCTG GAGCATATAG TCTTCTCGCG GTTGTGCTTT ACCATACTGG GGATTTTAAC CAGGCTACCA TTTATCAGCA GAAAGCACTC GACATAAATG AAAGGGAACT TGGACTTGAT CACCCAGACA CTATGAAAAG CTACGGCGAC CTGGCCGTCT TCTATTATCG TCTTCAGCAC ACAGAGTTAG CTTTGAAGTA CGTCAACCGT GCATTGTACC TTTTGCATCT AACATGTGGA CCATCACATC CAAATACGGC TGCCACTTAT ATTAACGTAG CAATGATGGA AGAAGGTATG AAGAATGCCC ATGTCGCTTT AAGATACCTT CATGAAGCTT TGAAATGTAA CCAGAGACTA CTTGGAGCTG ATCATATCCA GACTGCTGCA AGCTACCATG CCATTGCTAT TGCTCTCTCT CTGATGGACG CATACTCCTT GAGCGTTCAA CACGAGCAGA CCACTCTGCA GATTCTACAA GCAAAGCTAG GCCCTGAGGA TCTTCGGACA CAGGATGCGG CTGCGTGGCT TGAATATTTC GAGTCTAAAG CTCTGGAACA GCAAGAAGCT GCACGAAATG GTACTCCCAA GCCAGACGCC TCTATATCCA GCAAAGGCCA TCTCAGTGTA TCAGACCTGT TGGATTATAT AACCCCGGAT TCTGGTATTA AAGCAAGGGA CGCTCAAAGG AAAGCTCGCC CGAAGGTCAA GGGAAAACCA GGACAAAGTC CAGGACCAGT GTCAGAAGAA AATCAGAAAG ATGATGAAAT TTTGAGTCAG GCTCATCTCA CTGGGGAGAG TTCAAGTGAT AAAGAGAACA AATCCGAAGC AAAATTTGAA GAGAAAAAGG TTGAGAACTT TGATTTGGAA CCTCAAGAAC ATCTGACGCT GGTTAAGCCT GAAGCCATTG TCCAAGAAGA TGATGATTCT GACGAAGGAT GGCAAGAAGC TGTCCCGAAA AATCGTTATT CTTCTGGGCG TAGAACACGG CCCAGCCTGG CAAAGCTGAA CACCAACTTC ATGAACGTGA CCCAGCAGCC ATCAAGAAGC AGAGGAAAAT CCACCAATTT CACATCCCCA AGGACTAGTT CTAATGAGCT TTCAATTTCT GTTGCTGGTT CCACTTCTTC CCCAGCCTCG AAGATGTTTG TAAAGAGCCC ATTGAACAGA AAGCAAAACA ATTCCAGTGT AGTGGGAGAA AGACCAGTCA ACGATAAATC AGGCCCAGCA AGCCCAGCTT GCACTGAACA GATCAACAAG CCAACTCCGA TGGTGAGTCC TGTCACTCCT GTGAGTGTCA AAGCTGGAAA ACTGTTTTCC TATAAGGAGG TTGCACTGGC ACCCCCTGGA ACGATTGTTA AAATAGTTGC AGAGCAGTTG CCAGAAGAAA CGAAGGCCCC AGAGATTTTG GAAACGGCAA AAATTGCAGT AGATGGTCCT GAACAAGTTA ATGCTCAGGA TGCTGAGAGC GAGAATAAGC ATGTGGCTAC AGAAATGGAA GCCGAAAGCA CTGATAGCGG TGAACGAGGA GGGGTGGTTG TTGGTGGATC GGAGTTGACT AGTTCTCCAA AGGAAATCAA GAATGTGGAG GCCGAGAAGG CAGCTGAAGA AGCATTTCCA ACTGAGACAG CCGTATCAAA TGCAAGACAA GGAAAATCTG AGAGTGCACA AATGGCTGAG GATTCAAATA AATGTCTCTT GAATAAGTCA CTAACAGCAA ATGATTCAAA TGGCAGTGAA TCAGTTATTG GAGTGAAGCT ACAAAAGGAT TTATCTGATG CTGAACTGAA ACCAGTAGAT GGCGAAACAG AAAATCTGCC CAATGGAGAC TCAAGCCCAA AGTCATCAAT AGCTGCAGAT GGAGAAAAGC AAGACGCGTG CGAGGCTCAA AAAGAGATGA GCAAGAAGCT CTCTGCTTCT GCACCGCCGT ATACCCCAAC CACCATTCCA ATATTTGGAT CAATTGCAGT TCCAGGATTC AAAGAGCACG GAGGAATCCT CCCCTCTCCA TTGAATATGC CACCAATGCT TCCTGTTAAC CATGTCCGCA GATCTACTCC TCATCAGTCT GTAACAGCTC GAGTTCCTTA TGGGCCTAGA CTCTCGGGTG GTGGTTACAA CCGATCTGGA AACAGGGTTC TGCGTAACAA ACCAAGCTTC CCCAATAGCA CCGAGTCCAA TGGCGAGGCT AATCAATTCA ATGGCCCAAG AATAATGAAC CCCCATGCGG CTGAGTTCAT ACCGAGTCAA CCTTGGGTTT CTAATGGGTA TCCAGTGTCA CCAAATGGCT ATTTAGCATC CCCAAATGGG GCAGAAATAA CACAGAATGG GTATCCACTG TCACCAGTAG CAGGTGGATA TCCATGTGAC ATGTCCGTTA CACAGCCTCA GGATGGACTT GTTTCGGAGG AATTACCTGG TTCTGGAAGC TCTGAGGAGA AGAGCGGAAG CGAAGAAGAA AGCAACAACG AGAAAAAAGC TGGAGAGGAT GAAGAAGCCG TTGTACAAGA AACTTCAGAT ACACCTGAAA ATGGACATTC GACAGTAGGT GAAGTGGAAA CTACATCACA TGAGACCTCT GATGAGAAAA ATGGAGAACG ACAGGGAGGC AAGTGCTGGG GAGATTACAG CGATAATGAA ATTGAGCAAA TTGAAGTTAC AAGTTGAAGA AGCAACTGTC TGTCACT |
| Length | 5537 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 5505827.. 5514326 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G28080.1 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3 |
Ahg488319 | carbonic anhydrase 2 |
| 6.08276 |
Ahg484431 | glyceraldehyde 3-phosphate dehydrogenase A subunit |
| 6.63325 |
Ahg470142 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 6.9282 |
Ahg486548 | Transketolase |
| 7.48331 |
Ahg935733 | chloroplast signal recognition particle component (CAO) |
| 8.42615 |
Ahg920472 | Inorganic H pyrophosphatase family protein |
| 10.7703 |
Ahg482072 | genomes uncoupled 1 |
| 13.2665 |
Ahg492739 | |
| 13.7113 |
Ahg471331 | Glycine cleavage T-protein family |
| 15.3297 |
Ahg922278 | phosphoribulokinase |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|