Detail



ID : Ahg330954

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|330954|fgenesh1_pm.C_scaffold_8000297
Sequence
ATGGAAACGA TATTATTAAT ATCTCTGTGT ATAACGACAT TCTTAGCTCT TATGTTCATA AAATCACGAT CCAAACGAAC CACCACAAAA CTGAACCCAC CACCGTCTCC ATGGCGGCTT CCAGTGATAG GAAACCTCCA CCAGCTTAGC CTCCACCCTC ACCGCTCCCT CCATTCCCTC AGCCTCCGCT ATGGACCGCT CATGCTCCTT CACTTCGGTC GTGTCCCCAC CCTCGTAGTC TCATCCGCTG ACGTAGCTCA TGACGTCATG AAAACAAACG ATCTTAAGTT CGCCGACCGC CCCAAAAGGA AAGCTGTTTC TATGTTTCTG AATGGTGGGC GAGATGTGGC ATTTTCCCCT TTTTCCCCAG GTATATGTGT TATGCATCTG CTCAACAACA AAATGGTTCG GTCCTTTGAG AAAGTAAGAG AAGAAGAGAT AAACGTAATG ATGGAGAAGG TGGAGAAGGC GGCTTCTTCT TCTTCACCGT TGAACTTAAG ATTGCATTGG GAAGAAAATA TAGTAGTGAC GGCGAGGAGG TTGGTAATAC ATATAATGTT AATTAAGGAA ATAGTCAGAA AGACTATGGA ACTCTCAGGA TCTTTCCCGC TTGGTGAATA CATTCCTATT TTGGCATGGA TAGATAAGAT ATGTGGGGTG GATGATAAAG TAGAGGAAGT AAGTAACAAG ATTGATAGTT TTCTTGAAAA AGCAGTGCAA GAACATGTAG AGGATCATGC AGACAAAGAG AGGTCAGATT TTGTTGATAT ACTTGTCTCG ATTCAGAGAG ACAAGACTAT GGGATTTGAG TTTGATGTGT TTCTTGGGGG AACAGCAACT ACATTCACGC TACTAGAATG GACAATGACG GAACTTATGA GACATCCAGA GTGTATGAAG AAACTCAAAG ATGACATATA CTCCGCTTCG ACGACAACCG AAAAGTTATA TGTATCAGAG GAAGAAGTTG AGAAGATGAA GTACTTAAAG GCTGTGATCA AGGAAGTGCT ACGTTTGCAT CCTCCAGTTC CAATAATTCT CCGAGGATTA TGTGAAGATG TCAAATTAAA AGGATATGAT ATTGCTCAAG GAACATTGTT TGAAGGACAA GATTTCATGT ACATACCATT TGGATCAGGA AGAAGGCGTT GTCCCGGAAT AAGATTTGGA TTGACTATGG CCGAGGTAAC ACTGGCCAAC CTTGTGAAGC GGTTCGACTG GAGAACTAAG CCTGATCTAG CTGAAGCAAC CGGTGTTGAT GTTTGCCGCA AGTTTCCTCT TGTTGTCTTC CCATCATATG CTTTATTTTC CATGTGA 
Length1317
Protein Sequence
Protein Residue
Map Locationscaffold_8: 3123572.. 3126310
Download Sequence
A.thaliana
AGI-codeAT4G20235.1
Descriptioncytochrome P450, family 71, subfamily A, polypeptide 28
TAIR curator summary
Alias[CYP71A28]["cytochrome P450, family 71, subfamily A, polypeptide 28"]
Gene coexpression
MR
MR Locus Description
8.66025 Ahg473910 Dof-type zinc finger DNA-binding family protein
17.8326 Ahg895302
30.9677 Ahg942539
33.2716 Ahg480379 Auxin-responsive GH3 family protein
41.3763 Ahg481759 RmlC-like cupins superfamily protein
50.02 Ahg351609 Protein of Unknown Function (DUF239)
50.5569 Ahg495120 Protein of unknown function (DUF 3339)
56 Ahg485082 Glycosyl hydrolase family protein
56.6833 Ahg899116 ACC synthase 1
57.0789 Ahg479371 AGAMOUS-like 103
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression