Detail



ID : Ahg480379

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480379|fgenesh2_kg.3__3080__AT2G14960.1
Sequence
ATGGCGGTAG ACTCCAACCT CTCTTCGCCC TTGGGACCTC CGGCGTGTGA AAAGGATGCA AAAGCCCTCC GTTTCATAGA GGAAATGACC CGAAACGCAG ACACCGTTCA AGAAAACCTG CTAGCGGAGA TTCTGGCTCG CAACGCCAAC ACCGAGTACC TCCGCCGCTT CAACCTCGGC GGCGCCACCG ACCGTGATAC CTTTAAAACC AAGATTCCAG TCATTACCTA CGAAGATCTT CAGCCAGAGA TCCAACGCAT CGCTGATGGA GACCGCTCTC CGATCTTATC TTCCCATCCT ATCTCGGAGT TCCTCACTAG CTCGGGAACC TCAGCGGGAG AGAGGAAACT TATGCCGACC ATTAGAGAAG AGCTCGATCG TCGCCAGCTT CTTTACAGTC TCCTCATGCC CGTAATGAAT TTGTATGTGC CGGGTCTAGA TAAAGGAAAA GGAATGTACT TCTTGTTCGT TAAGTCAGAA TCAAAGACAC CGGGTGGGCT ACCGGCTCGA CCGGTTTTGA CCAGTTACTA CAAAAGTGAA CACTTTCGGT CTCGGCCATA CGATCCCTAC AACGTCTACA CAAGTCCCAA CGAAGCCATT CTCTGTCCGG ACTCATTTCA AAGTATGTAC ACTCAGATGC TTTGTGGCCT CCTTGACCGC CTCTCTGTCC TCCGCGTGGG CGCTGTCTTT GCCTCCGGTC TTCTCCGTGC CATTCGCTTC CTCCAGCTCC ATTGGTCTCG CTTCGCTAAC GACATTGAGT TAGGATGTCT GGACTCCGAG ATAACTGACC CGTCTATAAG ACAATGTATG TCCGGTATTC TCAAACCGGA CCCTGTCCTG GCAGAGTTCA TCCGCCGGGA GTGCAAGTCC GACAATTGGG AACGAATCAT CACCCGAATT TGGCCCAACA CTAAGTACCT TGACGTCATC GTAACTGGAG CCATGGCTCA GTATATCCCA ACGTTGGAAT ACTATAGCGG TGGTCTTCCG ATGGCTTGCA CCATGTACGC CTCCTCGGAG TGTTACTTTG GTTTAAACCT TAACCCAATG AGTAAACCCT CAGAAGTCTC TTACACCATC ATGCCCAACA TGGCCTACTT CGAGTTCATC CCTCTCGGCG GCACCAAGGC CGTTGAACTA GTTGATGTAA AGATCAGTAA AGAGTATGAA CTCGTTGTCA CCACCTATGC CGGTCTTTGT CGATACCGAG TCGGTGACAT CCTCCGAGTC ACAGGCTTCC ATAACTCCGC ACCTCAGTTT CACTTCGTGA GGAGGAAAAA CGTCCTCCTC AGCATCGACT CCGACAAGAC CGACGAGTCA GAGCTTCAAA AGGCGGTGGA GAATGCATCG AAGATTCTTC ATGAAGAGTG TGGGAGCCGT GTAGCCGAGT ACACTAGCTA CGCAGACACA AGCACGATCC CGGGCCACTA CGTCTTATAC TGGGAGTTGT TAGTGAGGGA TGGAGCGAGG CAGCCAAGTC ATGAGACCAT AACTCGTTGC TGCCTCGAGA TGGAAGAGTC ATTAAACTCG GTTTACCGAC AAAGCCGAGT CGCGGACAAC TCGGTTGGAC CTTTGGAGAT TAGAGTGGTG AGAAACGGAA CGTTCGAGGA ACTGATGGAT TACGCAATCT CAAGAGGCGC ATCAATTAAC CAGTACAAGG TACCAAGGTG CGTGAACTTC ACACCTATTG TGGAGTTACT AGATTCTAGG GTTGTGTCGG CGCATTTTAG CCCATCCTTA CCGCATTGGA CGCCGGAGAG GAGGAGAAGA TAAGGACAGG CCCATGTTTT TTTCCTTGGA GTTCTCGTGA AGTCAAAGGC TTTACATTAA TCAGCGATTT GGTCTTGTAA TATAATTAGA TTACTCGCTG GTAATTTAGT TTTTCTTGTC TTTTTTTTTT CTTAGTGTTG TTTTTTTTAC TCGTTTTTTT TAAAACTGTG GAATCTCTGT GTGTAATTTG 
Length1960
Protein Sequence
Protein Residue
Map Locationscaffold_3: 18535037.. 18537287
Download Sequence
A.thaliana
AGI-codeAT2G14960.1
DescriptionAuxin-responsive GH3 family protein
TAIR curator summaryencodes a protein similar to IAA-amido synthases. Lines carrying an insertion in this gene are hypersensitive to auxin.
Alias[GH3.1]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg887624
14.8324 Ahg890578 HSP20-like chaperone
14.8661 Ahg481759 RmlC-like cupins superfamily protein
15.9374 Ahg351609 Protein of Unknown Function (DUF239)
17.7764 Ahg929770 Protein kinase superfamily protein
18.3303 Ahg486927 cation exchanger 4
21.2132 Ahg917939 floral meristem identity control protein LEAFY (LFY)
24 Ahg951821
26.9815 Ahg478720 SKU5 similar 11
32.619 Ahg950383 Auxin efflux carrier family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression