| Annotation |
|---|
| Description | jgi|Araly1|331106|fgenesh1_pm.C_scaffold_8000449 |
| Sequence |
ATGCAGGGGG AGAGGGCCAG TCTTGGTTAT TTATCAGAGG CCTTGAACTT TGAGCATGGT TCTTCTTCGA GTAATGGTGT GATAGATCAT TGGGAGAATA TTCACAGTCT TGGTGATAAT GACTTGCAAG ATTACATGAT TGCAAATTCT GAATCAAATA CTTCGCTTGC AAACTCAGTT TATTGCGAGC AACAGGGTTT ACACAGATTT AGCCTCGGTG AGGCTAGCTC TAGTGGCACG AAAGATGAAG CTTCCAGTCA CAATGAGCAA CGAATGGAAA CTAGATGCTT TGACGGACGA AGAAATGAAA TAATTGATTT AGACCCAGTG TTTGCGCAGC CATCAGGCAC AAATCAACCT GTTCAGAGTG TCAATCTGAA TGCAGAATAT ATAGAAATTC ACGAGGATAT TAATCCATAT AGGGGTCGGT CTGGCTTCTT AGAAGCTAAT GGACCAGGGA CCAGGGTTTC ACAACCTGGC CGATCTTTTG AAGAGACCAG TGTTGGAACA GGTTCTTCTG TAGAGGGACG ACGTGCATCC TGCAAGAGAA AAGCTCTTGA AGGCAGTATT GGTCAATCTT CTTCAGGAGG TTATCGTGAT TTCCAGCGTG GAGAAAGCAG TTCATGGACC CCAGGTTCTA CGGTTTATAG GCCAGGAAAT GGTTTAAACA TATCTAGCTC CCTTGACAAT GGACCAAGAG GACTGGTCTC CGGTACCGTA CCAAATTTTC CTGTTTCTGC CATTGCAGAG AGCTCCAGTA GAAATATATG CGTCAGGAGT AATCCCTCAG ATCATCAAGA AACTGTAAAC CCAGCTACCT TTTCCGCGGG AACTGTTGTC AGGCGACCTG TCCCTCCATC CCAGTTGAAC TTATCAAGAG TCTTACCAGC AGATCATCAT TCATTGGACT TGAGACCTGG ACAGTCTTTT GTCTTTTCTC GTACCCCAAA TGCTACTGCT GTGAGCATAC CACCTGTTTC AAGGACTATG CTACCACCAT TTCGGTGGAC TGAGGGATCA CTAGCGGGTG GAACATCGAA CTCTACTGCG CCCGTTGAGA GAAATCTTCA TCTAGATGAA ACCAGATCAA GAAGCATACC CGGGAATACT CTAGAGATTC CCATGTTTGC AGCTCCTGAA CTCGGAAATT TTGCCCGTAG TCAGAGTAGC AGAAATGTAA CAAATGGAAA CCTGAATATT GCATCATCAG TGTCCAGGAC AGGCTCAACA ACAAGTGTTC CACCACCACC ATCTTCTAAT CTAGCGTGGA CTTCTTACCA GAATTCACCA CATTATCAAA GAAGAAGGAC TGAGAGGTCT GAACTTGTCC GTAGGTCCTT GCTTTCTTCC CTTGCAGGAG ATGCTACAAA CCAGAGATCA GGTGATCATC CAACACTTCG TTCGGTGGCC CCTCCTGCCT CTTCGGATGG GCTTGTGCTT CAGCCTGGTG GTGATAATAG TCAGATGCAT AATCGGGCTT ACTCGAGAGC AGGTCCTTGG TTTGATAGGC AAGGGGATAC TGTGGTTGGT ATTCCTCATT CTTTGCGGGC CTTGGCAGCT GCAAGCAGAG GAAGAAGCAG ACTTATGGTG TCCCAGATGC AGAATGTCTT GGATGTCATG CGTAGGGAGG GTAATAATAA CTTGCGGCTT GAGGACGTTA TGCTTCTAAA TCAGTCAGTA CTGTTTGATG GGGCTGCTGG TATTCATGAC CGGTATAGAG ACATGCGACT TGATGTGGAC AACATGTCAT ATGAGGAATT GTTGGCACTA GAAGAGCGGA TTGGAGATGT ATGTACCGGT GTAAACGAGG AAACCATATC AAACCGGTTA AAGCAACGAA AATACAAAAG CAACACAAAA TCTCCACAAG ATACAGAGCC ATGCTGTATT TGTCAGGAGG AATACACTGA AGGAGAAGAC ATGGGGACAC TAGAATGTGG GCACGAATTC CATAGCCAAT GCATAAAAGA ATGGCTGAAA CAGAAGAATC TGTGCCCAAT CTGCAAGACA ACAGGCTTGA ACACCGCGAA GAAGCGGAGG ATAGGATGA |
| Length | 2049 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 5005258.. 5007754 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G42940.1 |
| Description | RING/U-box superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg919586 | BRI1 suppressor 1 (BSU1)-like 2 |
| 5.65685 |
Ahg937238 | Transducin/WD40 repeat-like superfamily protein |
| 6.32456 |
Ahg475328 | aminophospholipid ATPase 3 |
| 6.48074 |
Ahg495958 | HEAT/U-box domain-containing protein |
| 7.93725 |
Ahg920833 | calcium-dependent protein kinase 1 |
| 8 |
Ahg488386 | U-box domain-containing protein |
| 10.0499 |
Ahg935334 | Peptidase family C54 protein |
| 11.4018 |
Ahg495654 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 15.4919 |
Ahg358235 | RNA binding (RRM/RBD/RNP motifs) family protein |
| 15.5885 |
Ahg489225 | phosphate deficiency response 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|