| Annotation |
|---|
| Description | jgi|Araly1|358235|fgenesh1_pg.C_scaffold_8002022 |
| Sequence |
ATGAGTGACC ATGGAGAGAA GACTTGTCCA CTGTGTGCTG AAGAGATGGA TCTGACCGAT CAACAATTGA AGCCTTGCAA ATGTGGCTAT CAGATTTGTG TTTGGTGCTG GCATCACATA GTGGACATGG CAGAGAAAGA TCAAATAGAA GGGCGTTGTC CAGCTTGTCG CACTCCCTAT GACAAAGAAA AAATTGTAGG GATGACTGTT GATTGCGACA GTCTGGCCTC TGAAGGCAAT ATGGAGCGCA AGAAGATCCA GAAGTCAAAA TCAAAACCTT CTGAAGGGAG AAAGCAACAA CTCACCAGTG TGCGAGTGAT CCAGAGGAAT CTTGTCTACA TTGTTGGGTT GCCTCTTAAT CTAGCCGATG AAGATCTACT CCAACATAAA GAATATTTTG GTCAGTATGG AAAAGTTCTA AAGGTTTCGA TGTCCCGAAC AGCATCTGGT GTCATCCAAC AATTCCCAAA TAATACATGC AGTGTATATA TTACTTATGG AAAAGAGGAA GAGGCTGTTC GCTGCATTCA GGCTGTTCAT GGGTTTATCT TGGATGGTAA ACCACTGAAG GCGTGTTTTG GGACAACCAA ATATTGTCAT GCATGGCTGA GAAATGTGGC ATGCGTCAAT CCTGATTGTC TGTATTTGCA CGAGGTTGGT TCTCAAGATG ATAGCTTCAC AAAAGATGAG ATCATATCAG CCTATACAAG GAGTAGAGTT CAACAAATCA CTGGAGCAAC AAATATTCTG CAGCACCGTT CAGGGAGCAT GCTACCTCCA CCACTGGATG CTTATTGCAG TGACAGTTCC TCTGCAAAAC CAATTATAAA GGTTCCTTCA ACTAGTGCAA CAAGTGTTCC CAGGTATTCT CCGCCTAGTG AGAGTGGGAG CTCTAGCAGA TCCACTGCTC TTCCTGCTGC AGCGTCATGG GGGACACATC AGTCTTTAGC AACTTCAGTT ACCTCAAATG GATCTTCTCA TATACAAAGA TCAACATCAG TAAATGGAAC CTTACCCTTT TCTGCTGTTG TTGCAAACGC AGCTCATGGG CCTGTATCCT CCAGTGACAT TCTTAAAAGA CCATCTCGCA AAGAAGAAAG CCAAATGGTT ATGGACAAAG TCAAAACTAG CGTGTTGAAG CCCTTGCAGC ATAATGTTGT GGTTTCTGGG TCCGAGAGAA CTACCTCACC TGATAGAGAT CCTACTAGCA ATCGTTTATC CAGTTCAGTA GACTCTTCCT ACGGTGGCAG AGACATTGAC CAGCCTTCAG CCTACAGTGG CAGAGACATT GACAAGCCTT CAGCTACTGT GAACTCGTCT GATGATGTAA ATGAAGCTGT AGAAGATGGC CCTACTGTAC ACAACTTGTC GGACGGTGTT GCACGCATGG GGATAACTGT GAAATGTAGG GATGAACGTC CTGATATTAC AATGGCGATT GGTAGTCAGT GTGATCAAGG TTCTATTAGA CAACCTGGTC ATGAAGTATC AAAGTTGCCA CATTTAGAGA AATGTAGGAT GGATAGTTCT ATAGACACTG ATAAGAAAGC TATCCCGTTA GAGGATAGGG TCCCCCGCAC AAGGCCAGAG TGGGATTGGA GATCAGATTT GCAATCGCAT ATGCAAGGAA GCTCAAAATT GCAAGAGGAG GAAATATTAT CATTTGACAG CCAACAGCAT CACCCTGAAG AGGATATTAT CCACTCGCGG TTTCTGTCTA ATTTGCCAAG TTCCAGTTTG GATACAAATC ATATGGCTTC TCGTTCTTCC CTGCCTTGTG AAATTTCAGG TGTGAACGAT TCAAATTTGA GGTCCTCTTT GGATAGAGGC AGTGATAGAT TGCATCTTCC AAATGGATTT GGTGAGAGAT CCATATCCAG TGTGGAGCAT TCTCTGTTTG CTAATGAAGA CAGGAACAAA GTCAACAATG TAGAGGATCC TATACTTTCG AACATTTTGT CACTCGATTT TGATCCATGG GATGAATCCT TGACTTCTCC CCACAATTTG GCAGAGTTAC TCGGTGAAGT TGATCAGCAA TCTAGTACTC TTAAACCTTC AAACCTCCTA AAGCAACATA ACAACCAGTC TAGATTTTCT TTTGCACGGT ATGAAGAATC TAGTAATCAA GCATATGACA GTGAGAACCT TAGCACTTAT GGGCAGTTTT CAAGAGATCA ACCTATTCAG GAGTCAGTAG TGAGCCGAGA TATCTATCGA AATAATCTCG GGAGCCTAAA TGGATTTGCT TCAAACTACG CTGGTGGATT GGATAACTTT GCTGCTAGTC CTTTATTCTC TTCGCACAAA AATCCTGTTT CACGACCCCA AGTTTCTGCA CCGCCAGGAT TTTCTGCTCC CAACAGGCTA CCTCCTCCTG GCTTCTCTTC ACATGAAAGA GTGGGCCTAT CTTCAGATAC CGCACTAGGA ACTCGATTTC TTGACTCTAC CTCCATATTG AGGAATGCAT ATCAAGTACC ACCTCCAGTT GGTAATTCAA ATGGTGCAAG TGATATTGAC TTTGTGGATC CTGCAATTCT AGCTGTTGGA AGAGGGCTGG TAAATGCAGA CTTGGATCTG AGATCAGGAT TCTCATCACA ACTGAATTCT TTTGAAAACG AAACAGGGCT CCATATGTTG AGACAGCAGT CCCTGTCTTC TGCACACCAA CAAGTTAATG GGTTTCATCA TGATCTCAGA AACGTATCTC CTTCACTTAA CGATCCTTAT GGATTTAGCG CAAGGCTAAT GGATCAAACA CAGGGAAGTA GCTTATCTCC TTTCTCACAG CTCCCAAGGC AACAACCATC TGCGAATTCA ATCTTGCCTA ATGGTCACTG GGATAAGTGG AATGAAGGGC AAAGTGTGAA CAATATAGGC ATGGCCAATC TTCTTAGGAA TGAACGGCTG GGTTTTAATG GGAGCTTGTA CAACAACGGA TATGAAGAAT CGAAATTCCG GATTCCAAGT CCTGGAGATG TGTATAACAG GACATATGGG ATTTGA |
| Length | 3006 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 18247552.. 18251988 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G60170.2 |
| Description | RNA binding (RRM/RBD/RNP motifs) family protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.47214 |
Ahg890818 | SNARE associated Golgi protein family |
| 5 |
Ahg328336 | RING/U-box superfamily protein |
| 9.8995 |
Ahg481178 | Protein kinase superfamily protein |
| 10.198 |
Ahg488386 | U-box domain-containing protein |
| 12.8452 |
Ahg929724 | aluminum-activated malate transporter 9 |
| 13.4164 |
Ahg471661 | Protein of unknown function (DUF1423) |
| 14.2829 |
Ahg480306 | chromatin remodeling 5 |
| 14.9666 |
Ahg947127 | Haem oxygenase-like, multi-helical |
| 15.4919 |
Ahg331106 | RING/U-box superfamily protein |
| 18.3303 |
Ahg928964 | Ubiquitin-conjugating enzyme/RWD-like protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|