| Annotation |
|---|
| Description | jgi|Araly1|489225|fgenesh2_kg.6__2359__AT5G23630.1 |
| Sequence |
GATTCCTTTT GGGTTTCGTC GTGATTCGAT CTTAGCATGT CAATTTGAAA ACCCTAGTTT TGATCTCTCT CGATTTCAAA TCCTACTGGT TGTGCAGAAA TCAAGGAACT TTAGACGATT TGAAGACGAA CTAGGTTTTG GTTTTGAGAT GTCGAGCTTT CGTGTGGGAG GAAAGGTAGT GGAGAAGGTT GATTTATGTA GGAAGAAACA GTTGGTGTGG CGCTTGGACG TTTGGCCTTT TGCGATTCTG TATACAGTAT GGTTGACTAC GATCGTTCCT AGCATAGACT TCACTGATGC TTGCATTGCG CTTGGTGCTC TTTCTGCTTT CCACATCCTA GTCTTGCTTT TCACTGCGTG GTCGGTGGAT TTCAAGTGTT TTGTCCAGTT TAGCAAGGTT AACAGTATCG ACCAGGCAGA TGCATGTAAA GTTACCCCAG CCAAATTTTC TGGTTCTAAA GAAGTCGTGC CTCTTCATTT TCGTAGCCAA ATGACAGGTT CGGCAGCCTC GGAAGACCTG GAAGAAATTT TCTTTGACTT CAGGAAGCAG CGTTTTATAT ACTCAAAAGA GTTAGGAGCC TTTTCCAAGC TTCCTTACCC CACAAAAGAA ACATTTGGTC ATTATTTGAA ATGTACTGGT CATGGTACAG AAGCTAAAGT TGCCACTGCC ACGGAGAAGT GGGGAAGGAA TGTATTTGAT TATCCACAAC CTACATTCCA GAAGCTAATG AAAGAAAACT GCATGGAACC CTTTTTTGTA TTTCAGGTTT TCTGTGTGGG TCTTTGGTGC TTGGATGAAT TCTGGTACTA CAGTGTGTTC ACACTATTCA TGCTTTTCAT GTTCGAGTCA ACAATGGCAA AAAGCCGCTT GAAGACATTA ACCGACCTAA GACGTGTTAG GGTGGACAGT CAGACCGTGA TGGTGTATCG ATCCGGAAAG TGGGTGAGGC TCTTAGGTAC AGATCTGCTT CCAGGAGATG TTGTGTCCAT TGGGCGACCT TCAACTCAGA CTGGAGGAGA GGATAAGACA GTACCAGCGG ACATGCTTTT ACTGGTAGGA AGTGCTATTG TAAATGAAGC CATTTTGACA GGCGAGTCAA CTCCCCAATG GAAGGTTCCC ATTGTTGGCC AAGGATCTGA TGAAAAATTA TCGATCAAAA GGGATAAGAA TCATGTTTTA TTTGGCGGGA CCAAGATCTT GCAACATTCA CCTGACAAGT CCTTCTCTCT GAAAACCCCT GATGGTGGCT GTCTAGCTGT TGTTCTCCGA ACTGGATTTG AGACGAGCCA AGGAAAACTA ATGAGGACAA TTTTATTTTC TACAGAAAGG GTTACTGCAA ACAGCTGGGA GAGTGGTCTG TTCATATTAT TTCTAGTGGT ATTTGCCGTG ATAGCTGCTG GCTATGTTCT TGTAAAGGGT CTCGAGGATC CTACAAGGAG CAAATATAAG CTTTTGTTAG GCTGTTCACT TATCATCACC TCAGTGATCC CGCCCGAATT GCCTATGGAA TTATCCATTG CTGTCAATAC TTCATTAATT GCTCTTGCTC GACGTGGGAT ATTTTGCACA GAGCCTTTTA GGATCCCTTT TGCCGGGAAG GTTGATTTGT GTTGTTTCGA TAAGACTGGT ACACTCACGT CAGATGACAT GGAGTTCCGA GGAGTTGGGG GCTTGTCTAA TTCTGAAGAA GCAGAGACTG ATATGAGCAA GGTTCCTGTA CGCACATTGG AAATTTTGGC TTCTTGTCAT GCCTTGGTCT TTGTAGACAA CAAGCTGGTT GGTGATCCTC TTGAGAAGGC TGCACTTAAA GGAATTGACT GGAGTTACAA AGCTGATGAA AAGGCCTTGC CTAGAAGAGG AAATGGCAAC TCGGTGCAGA TTATGCAGAG ATACCATTTT GCTTCGCATC TGAAGAGAAT GTCTGTTATC GTTCGTATTC AGGAGGAATA TTTGGTGTTT GTGAAGGGTG CGCCAGAGAC AATCCAAGAG AGGCTTGTGG ATGTGCCAGC ACAATATATC GAAACATATA AGAGATACAC ACGCCAAGGA TCTCGGGTTC TAGCCCTTGC GTATAAACGA CTTCCTGATA TGATGGTCAG TGAAGCTAGG GACATGGACA GAGATGCTGT TGAGAGTGAT CTTACTTTTG CTGGGTTTGC GGTCTTCAAC TGCCCCATTA GACCAGATTC AGCCCCCGTT CTCTTGGAGT TGAAGAATTC ATCCCATGAT TTGGTGATGA TAACAGGTGA TCAAGCTTTG ACAGCTTGTC ATGTTGCAGG CCAAGTGCAT ATTGTATCAA ACCCAGTTTT AATTCTTGGT CGATCAGGGA CTGGTAACGA ATACAAGTGG ATGTCACCTG ATGAGAAGGA GATCATACCC TACAGTGAAA AAGATATCGA AACCCTTGCA GAGACCCACG ATTTATGCAT TGGAGGTGAC AGCATTGAAA TGCTACAGGC TACATCTGCT GTTTTGCGAG TCATTCCGTT TGTTAAGGTT TTTGCGAGAG TTGCTCCACA GCAGAAGGAG CTGATCTTAA CCACCTTCAA AGCGGTAGGC AGAGGGACTC TGATGTGTGG GGATGGGACA AATGATGTTG GAGCATTGAA GCAGGCCCAT GTTGGAGTTG CCTTACTGAA TACTATACCT CCCTCGTCTC CATCGGATTC GTCTAAAGAT GACAAGTCAA AGTCAAAAAA GTCCAAACTG CCATTAGAAC CAGCAAGCAA AACTATAATT CAGAATGGGG AAGGATCATC AAAAGGAAAG ATTCCGCCCC AAAACCGTCA CTTAACTGCT GCGGAATTGC AAAGACAAAA GTTGAAGAAG ATGATGGATG AACTAAACAG TGATGAAGGT GATGGCCGGT CAGCTCCCCT GGTCAAACTT GGGGATGCAT CAATGGCATC CCCCTTCACA GCTAAACATG CGTCGGTTGC CCCAGTGACA GACATAATCC GACAGGGTCG TAGTACACTT GTGACGACTC TTCAGATGTT CAAAATTCTC GGTCTGAACT GTCTCGCCAC AGCTTATGTC CTAAGTGTTA TGTACTTAGA CGGTGTAAAG CTCGGTGATG TCCAGGCTAC AATCAGCGGA GTATTAACAG CTGCGTTTTT CCTCTTCATT TCTCATGCCC GACCGCTTCA AACCCTCTCT GCAGAACGAC CCCACCCGAG TGTCTTCTCC TTGTACCTCT TCCTCTCTCT GCTAGGTCAG TTTGCTGTTC ACTTGACCTT CTTGATCTAC TCTGTGAAGG AAGCTGAGAA ACACATGCCC GAGGAATGCA TCGAACCAGA CGCAAGTTTC CATCCTAATC TGGTGAACAC AGTGTCGTAC ATGGTGAGCA TGATGCTTCA GGTTGCAACA TTTGCTGTGA ACTACATGGG ACATCCCTTT AACCAGAGTA TCAGAGAAAA CAAACCGTTC TTCTACGCAC TGATTGCTGG AGCAGGGTTC TTCACCGTCA TCGCCTCTGA TCTCTTTAGA GACCTGAACG ATTCGCTGAA GCTGGTTCCA TTACCTCAAG GTCTGAGGGA TAAGCTTCTC CTCTGGGCCT CACTTATGTT CATCATCTGC TACTCGTGGG AGCGGTTGCT CAGGTGGGCT TTCCCCGGTA AGATCTCTTC TTGGAAACAT AAGCAAAGAG CTGTCACTGC AAATCTGGAG AAGAAGAAGA AAGTTTGAAG AGAAACCAAA CAGGTTAGGT TGAGGTAATA ATCATCAATC CATACATTTT TTACTCGAGA AAGATGTTTG TTATTGGGGA TCTTGTTTTG CAGAAAGCTT CCAAAAAAAA AAAAAACATG AGCATTTTTC CCATAGGTCT CACATTTTGT CTCATTACCT TATTTTGTCA CTCTCTAAGA ACCACTAAAT CTAAGGGTTT TCATTATTAG TCTCTGTAAT TGTTTCTTTG TTTTACTTTC TTTGTATAA |
| Length | 3939 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 9602384.. 9609925 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G23630.1 |
| Description | phosphate deficiency response 2 |
| TAIR curator summary | A member of the eukaryotic type V subfamily (P5) of P-type ATPase cation pumps; MIA is most similar to the human P5 ATPase ATY2(44% identity) and to Spf1p from S. cerevisiae (41% identity). Highly abundant in the endoplasmic reticulum and small vesicles of developing pollen grains and tapetum cells. T-DNA insertional mutants of MIA suffer from imbalances in cation homeostasis and exhibit a severe reduction in fertility. Mutant microspores fail to separate from tetrads and pollen grains are fragile with an abnormal morphology and altered cell wall structure. MIA is also named PDR2 and was shown to be required for proper expression of SCARECROW (SCR), a key regulator of root patterning, and for stem-cell maintenance in Pi-deprived roots. |
| Alias | [MIA][PDR2][PDR2][MALE GAMETOGENESIS IMPAIRED ANTHERS][phosphate deficiency response 2][PI DEFICIENCY RESPONSE 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg919586 | BRI1 suppressor 1 (BSU1)-like 2 |
| 4.89898 |
Ahg489126 | Adaptor protein complex AP-2, alpha subunit |
| 5.74456 |
Ahg494761 | Sugar isomerase (SIS) family protein |
| 6 |
Ahg487745 | NAC domain containing protein 82 |
| 8.77496 |
Ahg928450 | Kinase-related protein of unknown function (DUF1296) |
| 9.21954 |
Ahg327819 | Plasma-membrane choline transporter family protein |
| 9.79796 |
Ahg476423 | Survival protein SurE-like phosphatase/nucleotidase |
| 12.3288 |
Ahg340908 | glucan synthase-like 10 |
| 12.4097 |
Ahg481593 | C2H2 zinc-finger protein SERRATE (SE) |
| 12.6491 |
Ahg483042 | nuclear RNA polymerase D1B |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|