Detail



ID : Ahg331179

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|331179|fgenesh1_pm.C_scaffold_8000522
Sequence
ATGGCGAGGC TGTCTTGGCA AGCCGTGGCG GTTGTGGGGG TTCTGCTGGT AGTAGTCCTG TCTTTTGCAG ATGGGTACCC AGAAGCAGAT TTTGTTGTGA AGCTGCCAGG GCAACCAACG GTAACGTTCA GACAGTACGC CGGGTATGTT GATATCGACA AGGTTGTTGG GCGGAGTCTT TTTTACTACT TCGTGGAGGC TGAAAAACGT CCTGACACAA AACCGTTAAC ATTGTGGCTC AATGGAGGTC CAGGTTGTTC TTCTGTTGGT GGAGGAGCTT TCACTGAGCT AGGTCCATTT TACCCCACAG GCGATGGCCG TGGCCTCCGC ATTAACTCCA TGTCGTGGAA CAAAGCATCG AACCTGCTAT TTGTGGACTC ACCGGCTGGA GTTGGATGGT CATACTCCAA CCAAAGCTCT GATTACAACA CCGGGGACGA GTCTGCTGCC AGTGATATGC TTGTGTTCTT GTTGAGATGG TTCGATAAGT TCCCGGAATT GAAGTCTCGC GACCTCTTTC TCACAGGCGA AAGCTATGCT GGACATTACA TACCTCAACT GGCTGATGCG ATTCTCAGCT ACAATTCACA CTCGAGCGGG TTCAAATTCA ACATCAAAGG CATTGCGATT GGGAATCCAC TTCTTAAGCT TGACAGGGAC ATTCCAGCTG TATACGAGTT CTTCTGGTCG CATGGCATGA TCTCTGATAT AGTGGGACGC ACAATCAGGA GTCAATGTGA CTTCTCACAT TACACGTATG CGTACCCACA TAACGCAAGT GATGCTTGCA ACGACGCTAC CACTGAAGCG GGAATCGTCA TCACTGAATA TGTCAACAAC TTTGATGTTC TCCTTGACAT TTGCTACCCG TCAATTGTCC TACAAGAACT AAGGCTCAAG CAAATGGCCA CAAAGATGAG CATGGGAGTG GATGTCTGTT TGACCTACGA AAGACAGTTC TACTTTAATC TCCCAGAGGT ACAGATGGCG CTTCACGCAA ACCGCACTCA TCTGCCTTAT GAATGGTCTT TGTGCAGCAA CCTGTTAAAC TACTCTGGCA TCGATGTAAA CACCAACATG CTTCCGCCTC TGAAGAGAAT TATACAGAAC AAAATTCCGG TTTGGATCTT CAGTGGAGAT CAAGATTCGG TAGTTCCATT TCTTGGAACA AGAACTGTCG TACAAGAACT CGCCGACGAT CTCAATTTCA AGACGACAGT TCCATATGGA GTGTGGTTCC ATAAAAGACA GGTTGGAGGC TGGGCCATCG AGTATGGAAA CCTACTCACG TTTGCAACAG TGAGAGGAGC GGCTCATGCG GTGGCGTACA AGCAGCCCTC TCGAGCTCTG CATCTGTTCA GCACCTTTGT GCGTGGACAG AGATTGCCTA ACAAGACCGA TATAGGTTTT CATGATTGA 
Length1419
Protein Sequence
Protein Residue
Map Locationscaffold_8: 6420297.. 6422490
Download Sequence
A.thaliana
AGI-codeAT5G42230.1
Descriptionserine carboxypeptidase-like 41
TAIR curator summary
Alias[scpl41][serine carboxypeptidase-like 41]
Gene coexpression
MR
MR Locus Description
11.9583 Ahg940223 F-box family protein
14.6969 Ahg473911 Transmembrane amino acid transporter family protein
18.4932 Ahg478015 Pseudouridine synthase family protein
19.0526 Ahg486655 Protein of unknown function (DUF3133)
19.4679 Ahg490301 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
23.3238 Ahg472939 squamosa promoter binding protein-like 10
24.4336 Ahg894572 Protein of unknown function (DUF1645)
36.4143 Ahg489246 cleavage and polyadenylation specificity factor 100
39.4968 Ahg473363 ATP-binding cassette 14
50.7543 Ahg480100 anaphase-promoting complex/cyclosome 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression