Detail



ID : Ahg472939

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472939|fgenesh2_kg.1__2893__AT1G27370.2
Sequence
CAAAAGTTAC GCCAAAAGAA CAAGAAATTG AAAAAGCAAA GAAACAATAG TGACAAAAAG GAAAGGAATA ATGAAAAATT GGAAGGATGA AATTAATCTC GAGCAGCTCA TCCGATTGCC CTCAGGCGAT TATGGTGTCT CCGACTCCTC CTCACTCTCG CTCTTAGTAC GATCGCCGAC CGACCTCCGG AGCTTTCTTC TCTGTTTTGC TACTCGAGGT TTCTATTATA GGTCTATGAA ATCAACCCAC ATCTTGAATG GACTGCAACA TGGTATCTCC GTTCCCGTGG GACTGGGAGA ATTTGATCAT GTCCAATCCG TCAAAGACTG AAAATGAAAA AAGGCAGCAA TCTACTGAGT GGGAATTTGA AAAAGGTGAT GGAATTGAAT CTATAGTTCC AGATTTCTTA GGCCTTGAGA AAGTCAGTAG TGTCTCTGCC ACTAGTTTCT GGCACACTGC TGTATCAAAA AGCTCGCAGT CGACCTCTAT CAACTCATCA TCTCCCGAGG TCAAACGATG CAATCTTGCA TCACAAAGTT CCCCTGGAGA TTCTTCCAGC AACATAGATT TTGTCCAGGT GAAGGCATCC ACAGCTCTCG AGGTATCTGT TGCCTCAGCT GAATCAGATC TTTGTTTAAA ACTAGGAAAA CGGACATACT CTGAAGAATT TTGGGGTAGC AACAATAATG ACATTTCAGC AGTTTCTATG AATTTGTTGA CTCCATCTGT TGTTGCTCGG AAGAAAACCA AATCGTGTGG TCAGAGCATG CAAGTTCCGC GTTGCCAAAT TGATGGCTGT GAGCTGGATC TCTCATCTGC TAAGGATTAT CATCGCAAGC ATAGAGTCTG CGAAAAGCAT TCAAAGTGCC CAAAAGTTAT TGTGAGTGGC CTGGAACGTC GTTTCTGCCA ACAGTGTAGC AGGTTTCATG CTGTATCAGA ATTTGATGAG AAGAAACGAA GCTGCCGCAA ACGTCTTTCT CATCATAATG CAAGGCGTCG AAAGCCACAA GGAGTATTTC CACTGAATTC AGAGAGGGTG TACGATCGAA GACAGCACAC AAGTATGTTG TGGAATGGGT TGTCCCTTAA CACGAGATCT GAAGAAAAGT ATGCATGGGG TACCACTTAT GAGACAAAGC CTACACAGAT GGAAAGCGGC TTTACTCTGA GCTTCCAGAG AGGTAATGGC TCTGAGGAGC AGCAGTTTGC TAGTAGCAGC CTCTCTTTCT CTGCGTTTCA AACCTCTGGC GGGTTCCCAG CAGGGAAATC CAACGTTCAA CTTCCTGACA AAGGTGTGGG AGAATGCTCA GGAGGCCTCC ATGAATCTCA TGATTTCTAC AGTGCTCTCT CTCTTCTGTC AACGACTTCG GATTCACAAG GGATCAAACA CAATCCCGTG GCTGAACCAC CGCCAATATT TGGCACTTTC CCTACTCATT TCATATGAAA GAGTAAGGAA GTCACTCCAT AAAAAGTCGG GTTGCATTCG ATGGAGCTTG TTTTCAAATA AAATAAAAAT G 
Length1521
Protein Sequence
Protein Residue
Map Locationscaffold_1: 11378297.. 11381190
Download Sequence
A.thaliana
AGI-codeAT1G27370.1
Descriptionsquamosa promoter binding protein-like 10
TAIR curator summaryIn conjunction with SPL11 and SPL2, SPL10 redundantly controls proper development of lateral organs in association with shoot maturation in the reproductive phase. SPL10 also controls lamina shape during vegetative development.
Alias[SPL10][squamosa promoter binding protein-like 10]
Gene coexpression
MR
MR Locus Description
5.2915 Ahg489601 DNAJ heat shock N-terminal domain-containing protein
7.14143 Ahg928725 pumilio 4
9.16515 Ahg939568 Concanavalin A-like lectin family protein
13.0384 Ahg913525 glutamate receptor 3.3
13.0767 Ahg487751 CD2-binding protein-related
17.7764 Ahg324943 LHY/CCA1-like 1
22.2486 Ahg931973 Secretory carrier membrane protein (SCAMP) family protein
23.3238 Ahg331179 serine carboxypeptidase-like 41
25.807 Ahg478983 Leucine-rich repeat (LRR) family protein
31.749 Ahg496370 signal recognition particle-related / SRP-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression