| Annotation |
|---|
| Description | jgi|Araly1|331248|fgenesh1_pm.C_scaffold_8000591 |
| Sequence |
ATGGAGGATA CTCGGTCAGT TGCTTCGCTC ATGGACTCTA CATCGTCTAA GATTCAGCAG CTTCAGAAGG CGTTTGCTGA ACTTGAAAGT CAGCGTGCGG TAACACTTAA TCTGAAGTGG AAGGAACTTG AGGAGCATTT TCATGGGCTT GAGAGGTCTT TGAAGAGACG GTTTCATGAG CTTGAAGATC AAGAAAAAGA GTATGAAACC AAAACAAGGA AAGCTCAAGA ACTGTTGGAG AAAAAGAAGG CAGCTGTTGA GGCTAAGGAG AAGGCGTCGC TTGAAAGGCT TCAGAAGAAG AGAGACGCCG CTATGTTTAC TATAAACAGT GCTTTAGATA AGTACAATAA CGCTCCCATC AGTAAACCTT CTGTTGGTGA ACGTTGGCCA CAAAATCCTG TAGGGGATTC TTCCAATGCC TTTGCTGCTG ATAGTATTAC CGATGATAAT CCGGATGGTA CTGTGCACGA TGTTCAGATC TCACCTGTGA TGGGAAATTT TGAGGTGAAG GCTTATCCAC AGTTGCTGAA ACTGTGCGGG GATATGGACT CAACTGGGCT CCATAAGTTT GTATCAGATA ACCGCAAGAA CCTTGCATCA CTAAAGGAGG AGATTCCTAT GGCGTTCAGG GCTGCAGCAA ACCCAGCCAG CTTAGTGTTG GACTCTTTGG AAGGGTTTTA CCCCATGGAG GCACCAACTG CTGATGGAAA GAAAGACGCT AACCTCTTGG GCATGCGCAG AACCTGTATC ATGTTGATGG AGTGCCTTAG CATACTGTTA TCTGGTCTGG ACCCCAACTC CCTTGCTGCT GTTCTCTCAC AGAATGTTAA GCGTAGAGCC AAAAGTATTG CAGAAGGATG GAATCCACTG CTGGAGTCTC TTGACATGGA TGCTTGCAAT GGTAATTCTT TGGAGGCTCA TGCATTCCTG CAACTGCTGG CCACTTTTGC TATTGTTGGT GACTTTAAAG AGGATGAACT CTTAAAGCTG ATCCCCATGG TTTCACGTCG CCGTCAGGCA GCTGAGCTCT GCCGTTCACT TGGATTAGCT GGAAAAATGC CTGGTGTGAT TGAAGTTCTC GTGAACAGTG GAAAACAGAT TGATGCGGAT GAGTTCAATG AGCGGGAGCT TACAGGGCTC AAAACCGTGA TAAAGTGTAT TGAAGAGCAT AGCCTGGAAG AGCAGTACCC AGCTGAGCCA CTTCACAAAC GAATTCTCCA GCTCGAGAAG GCCAAAGCAG ACAAAAAGAG AGCGACAGAG CCCACAAAGC CTCAGCCAAA ACGACCACGT GGTGCTCAAC CCCGAGTGCC CGACAACAAC AACAACAACA TCAAGACAGG ATACGGTAGA GTCATACCTG AAAGACTTAC ACTTTCAGTC CCGCTCCTGC ACACGGGAAC TTCTACGGAA ACTGCTATCA GTACCAGGCT CCTCCTCCTC CTGCTTACTT TCACTAGTGA TAAAAAAAAA AGACAATCCC TAACTCGACT GAGTCAACTC GCTCCTTTTC CCGATAACTC CTTCAAGCTC ACCATATGGA AGCTTAGCTT TCGCCTCTGG AACGCTTGTG TTGATCTCTC TAACGCCGCC TCTCTACAAT CCTCTTCAAC CTCCGCTGAG AGCATCGCGA ATCTCAGGCA TGTTGCCGCC GATATGCTAT TTCTCGCTAA GGATGTTACC GGAGTTCCAT CTCCGACGAT TAAGTCTTCT CTCTTCTACT ATAGGACCGG TCTCGTTTAT CACAGTCTCA AGAAATTTGA TCTCGCCTCC GGTTGCTTTG AGAGAGCAAC CGAAATCGTT TCGAAAATCG ATATCGCGAA AATTTCCGAT GCCGGAGAAA AGAAATTGTT TCTGGATCTA AACCTAGCTA GATCTCGAAC TGCCTGGGAA ATTTCTGATA GGAATTTAGC TGTAACGTTG CTCAATCGAG CGAAGAATAT GTTGTTTGGT TCACCGGATC ATTACAAATC GCTCTCAAAT CAATTCCTTG CGTTTGGTAA AAGCTCTTTG TCTAGAGATG ACGACGATTG CAGTCTAAAC GATGCTCTTA GGCTCATGAA TGAAGCATTG GATCTTTGTG AGAAGGGATT AGGTACTGCA AAAACTCGGG AAGATACCAT GGAGTTCACG GGGATGAGAA TCAAAACTCT GCGTTTCATA TCAGCAGTGC ATTTGCAGAA GGGAGAGTTC GAGAATGTGA TCAAATGTGT GAAAGTTCTC AGGAATGGAG GAAATGGTAG TGATGGAGCA GATCAACATG CTTCATTACC TGTGTTGGCG ATGAAGGCTT GGTTAGGGCT TGGGAGACAT AGTGAGGCAG AGAAGGAGCT GAGAGGTATG GTGGGAAACA ATGATATTCC AGAGGCTGTG TGGGTATCTG CTGTGGAAGC ATATTTTGAG GTGGTGGGAA CTGCTGGAGC AGAAACTGCA AAGGGTGTGT TCTTAGGTTT GCTGGGAAGG TGTCATGTTA GTGCAAAGGC GGCGCTTAGA GTGGCTCATC GGGTGCTTGG TGAGAGTAGG GGAGGTGATA ATGGTTCGAG AATTAGGGCA AATGTTGTGG CTCAGCTCGT ATCAGACGAG AGAGTTGTTG CTCTCTTTGC TGGTGAAGCA GTGACCAAGG AGAGGAAGGC AATACATTCT GTTCTCTGGA ACAGTGCTTC AGATCATTTC CGTGCTAAAG ATTATGAGAC AAGTGCAGAG ATGTTTGAGA AGTCAATGCT CTATATTCCA CATGATATAG AAAATAGAGT TTTCAGGGCC AAAGGCTTCA GGGTTTTGTG TCTTTGCTAC CTTGGGCTCT CTCAGCTGGA TCGAGCTCTT GAATACATAG AAGAAGCTGA AAAGTTCAAG ATCTACCTGC AAAAGAAGGA GCACAGTTCG CATGAAGCTA TTTCTTGCCA AGCGCTTCCA GTTGCTGTTG CTTCTCTTTC CAAGTTTCTC AGTTTCTATA TCTCTGGAAA AACAATGCCA ACCACAGAGG TCGTGGTCTT TCGTACCTTA ATCACTATAT TGACTCAAGA CATTGGCAGC GAAACCGAAG CTCTTAACTT TATGTTGCAA GCTCAGAGCA GGGCATCTAA GCTTGGGACA GAGTGTTTCT TTGGATCAGG AGAGACTGGA AAGCGAGAAC GGAACTGGTT TGCTGTAACT TGCTGGAACC TTGGGTCAAG ATGTGGGAAT GCAAAGAAGT ATGAGCTCTG TGGTGAATTC TTGAGGCTGG CATCGGAATT TTACAGCTAT ATGATGGATA CTGATGAGTC TGGAGAAAAC AAAATGATGA TTTGCAGGTC CATAATACTA AATGTCACCG CTATGATTGC TTTGGAGAAG CAAAACAAGA GCGCACTGAC TGAAACTCAA GTGAAACTTG CTGCAGAATT GCTCATTATG TCTTCTTCGC TCTCAAATGG TAAAGATTGT ATCATGGAGC CAGAACTCAA CTTCATGTAC ACCTTACTTG CGTATGACAT ACACGGAAGG CTCAACAATT CGGCATTCCA GTTACTTGTG GTAAAGACAT TTGCTGGTTC CAAGTCTTGT CATTACAATT ATCTTCTCCA ACTTGGAATT TTCGCCTCTC AAAGCCCTCA GTCCAACCCA GACGTGTCAA CATTTGCTCT TAACGAATGC CTATCCGCTC TGATCGCATC CGCTTCACCA GATTACCCAA CCATAGCTCT CATAATCAGG AAGCTGATCT TCATATCCAG CATCCACAAA GGCGATACAA ACGATGAAGA AGCAATTTTA AAGATGTACA AACTGGCATA CAGAATCATG GTTGGGTTAA AGGAAGGGGA ATACCCGACT GAAGAAGGGA AATGGCTCGC AATGACAGCT TGGAACCGAG CAGCATTGCC CGTGAGGTTA GGACAGTTTG AGACCGCTAA AAAATGGCTG AGCATGGGTT TGGAAATAGC TGAGAAGGTT ACAGGTATGG ATACTTATAA AGCTTGTATG CAGGATTACT TGGCTGGTTT TCAGACCAAA GTTTCTTCTG CTTAG |
| Length | 4005 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 11018096.. 11023960 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G48390.1 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| TAIR curator summary | Defective in meiotic chromosome segregation. It is involved in crossover formation and involved in both male and female meiosis. |
| Alias | [AtSPO22][ATZIP4][A. thaliana homologue of yeast SPO22] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.9282 |
Ahg474459 | phosphoenolpyruvate carboxylase 1 |
| 8.30662 |
Ahg478309 | cell division cycle 48 |
| 9 |
Ahg483908 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 9.53939 |
Ahg946855 | FRIGIDA-like protein |
| 9.53939 |
Ahg934753 | Integral membrane Yip1 family protein |
| 9.74679 |
Ahg494761 | Sugar isomerase (SIS) family protein |
| 10.9545 |
Ahg483560 | Citrate synthase family protein |
| 12.6491 |
Ahg477180 | Transducin/WD40 repeat-like superfamily protein |
| 13.3041 |
Ahg938635 | Ubiquitin-associated (UBA) protein |
| 15.2315 |
Ahg493662 | Protein phosphatase 2C family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|