Detail



ID : Ahg494761

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494761|fgenesh2_kg.8__577__AT5G42740.1
Sequence
GAACCTTCCG TCAACACGTG TCATACCCTC AGCTCTCACA CTTCCCTATC GCTTTTTTTC TTTTCCTCTC TCTCAATAGC TTTCTTCTTC TCACAATTCC AGAATCTTCT TCTTCACCTC ATCTTCGAAG ATCTTCAGTA ATGGCGTCAT CAACTGCTTT GATTAGTGAT ACCGAAGCGT GGAAGGATTT GAAGGGACAT GTTGAAGATA TTAAGAAGAC TCATTTGCGT GATTTGATGA CTGATGCTAA TAGATGCCAG TCCATGATGA TGGAATTTGA TGGGTTGCTG TTGGATTATT CTCGACAGCG TGCAACTGTA GAGACAGTGG ACAAGCTTTT GAACTTGGCA AAGGCTGCAC AGTTGACTGA GAAGATCAGC CGCATGTTCA ACGGGGAGCA TATTAACAGT ACGGAGAACA GGTCAGTTCT TCATGTTGCG CTCCGTGCTC CAAAGGATGC AGTTATCAAG GCTGATGGAA AGAATGTGGT TCCAGAAGTG TGGAACGTTC TAGATAAGAT CAAGGAATTT TCTGAGAAAA TTCGCTCTGG TTCATGGGTA GGAGCCACTG GCAAACCGCT GAAAGATGTC ATTGCGATTG GTATTGGTGG TAGCTTCTTA GGTCCACTGT TTGTACACAC GGCTCTCCAA ACAGACCCTG AAGCTCTAGA GTCTGCTAAA GGACGTCAGC TGCGATTCCT TGCGAATATT GATCCTGTTG ATGTTGCTAG AAATATCATC GGACTAAATC CAGAAACTAC TCTAGTTGTG GTGGTCTCAA AAACATTTAC AACAGCAGAG ACAATGTTGA ACGCTAGGAC ATTGAGGGAA TGGATAACAG CTGCTCTCGG GGCTTCAGCT GTTGCAAAAC ACATGGTTGC TGTCAGCACT AATCTTGCGT TAGTGGAGAA GTTCGGAATT GACCCGAACA ATGCATTTGC ATTTTGGGAC TGGGTTGGTG GAAGGTACAG TGTTTGCAGT GCGGTTGGAG TCTTACCTTT GTCTCTGCAG TATGGCTTCT CCGTGGTTGA GAAGTTTTTG AAGGGAGCTT CAAGCATTGA TCAGCATTTC CAGTCCACAC CGATCGAGAA GAATATACCT GTACTTTTAG GGTTGTTGAG TGTATGGAAT GTATCATTTC TTGGATACCC TGCCAGGGCC ATCTTACCTT ACTCCCAAGC CCTTGAGAAA TTTGCTCCAC ACATTCAACA GGTTAGTATG GAGAGTAATG GAAAGGGAGT CTCAATTGAT GGTCTACCTC TCCCGTTCGA GACTGGTGAG ATTGATTTTG GTGAACCTGG TACAAATGGT CAACACAGCT TTTACCAACT AATTCACCAG GGACGCGTAA TCCCTTGTGA TTTCATTGGC ATTGTGAAGA GTCAGCAACC TGTGTATCTG AAGGGAGAGG TGGTCAGTAA CCACGACGAG CTCATGTCCA ACTTTTTTGC CCAGCCTGAT GCTCTTGCTT ATGGAAAAAC ACCTGAACAG CTGCAGAAAG AGAATGTTTC AGAAAATCTC ATTCCCCACA AGACATTCTC CGGAAATCGA CCTTCTCTTA GCCTTCTACT TCCAGAATTG ACTGCTTACA ATGTTGGCCA GTTATTGGCA ATCTATGAAC ACAGAGTAGC AGTTCAAGGC TTTGTGTGGG GTATCAATTC GTTTGACCAA TGGGGAGTTG AGCTAGGAAA AGTTCTTGCT ACTCATGTGA GGAAGCAGCT TCATTCATCA CGCACTCAAG GCACCACTCT CGAGGGATTC AATTACAGTA CCACCACACT TTTGAAACGA TATCTCGAGA CAAGTTCCGA GCCACAGATG TGATGAACAA GCCCCAGTTT CTCCTTCACC CAAACGTGAA CCATTCCCGC ATTTTGCACT CCTGTTCTTC TCTTTTTCCA CTGTCCCTAA TCAGAGTATA CTTTATCGGC ACTCATAAAT TATCTAAAAA TGGGTACTAA TAAATCCAAA CCCCATAAAA TCAGAATTGG GAGCATAATA TCAGACAGCT TTTTTTCTAA TTTATATGCA C 
Length2031
Protein Sequence
Protein Residue
Map Locationscaffold_8: 5461114.. 5466438
Download Sequence
A.thaliana
AGI-codeAT5G42740.1
DescriptionSugar isomerase (SIS) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg489215 Mov34/MPN/PAD-1 family protein
3.74166 Ahg939446 transducin family protein / WD-40 repeat family protein
5.56776 Ahg478309 cell division cycle 48
5.74456 Ahg489225 phosphate deficiency response 2
7 Ahg482666 glucan synthase-like 8
9.74679 Ahg331248 Tetratricopeptide repeat (TPR)-like superfamily protein
10.198 Ahg488386 U-box domain-containing protein
10.3923 Ahg340908 glucan synthase-like 10
11.6619 Ahg948276 Clathrin adaptor complexes medium subunit family protein
15.3623 Ahg488259 Proteasome component (PCI) domain protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression