| Annotation |
|---|
| Description | jgi|Araly1|478309|fgenesh2_kg.3__1010__AT3G09840.1 |
| Sequence |
AGAGATATAA TTAGCGAACT CCTTCAGATC CCATTATCAC AAATCGATCT CTCTCTCAGA AACCAAAAAG CTCTCAACTT TCTTCGATTT CTGCGGGAAC TCGTTCGTTA TTCTCAAACT CAATCATGTC TACCCCAGCT GAATCTTCAG ACTCGAAATC GAAGAAAGAT TTCAGTACTG CTATTCTCGA GAGGAAGAAG TCTCCGAACC GTCTTGTCGT CGATGAGGCA ATCAACGATG ATAACTCCGT CGTCTCTCTT CACCCTGCAA CCATGGAGAA GCTTCAGCTC TTCCGTGGTG ATACCATTCT CATCAAGGGT AAGAAAAGGA AGGACACTGT CTGCATTGCT CTCGCCGATG AGTCATGTGA GGAGCCAAAG ATCAGAATGA ACAAAGTAGT CAGATCTAAC TTGAGGGTTA GACTGGGAGA TGTTATTTCT GTTCACCAAT GCCCAGACGT CAAGTACGGA AAGCGTGTGC ACATCTTGCC TGTTGATGAT ACTGTTGAAG GAGTGACTGG AAACCTCTTT GATGCTTACC TGAAACCTTA TTTCCTGGAG GCATACCGTC CAGTGAGGAA GGGTGATCTC TTCCTAGTCA GAGGAGGCAT GAGGAGTGTG GAGTTCAAAG TCATAGAGAC AGATCCTGCT GAGTACTGCG TGGTTGCTCC AGACACAGAG ATTTTCTGTG AGGGTGAGCC TGTGAAGAGA GAGGATGAAG AAAGGCTAGA TGATGTAGGT TATGATGATG TTGGCGGTGT CAGGAAACAG ATGGCTCAGA TCAGAGAACT TGTTGAACTT CCCTTGAGGC ATCCACAGCT ATTCAAGTCA ATTGGTGTTA AGCCACCAAA GGGAATTCTT CTTTATGGAC CACCTGGGTC CGGAAAGACT TTGATTGCTC GTGCTGTGGC TAATGAAACT GGTGCCTTTT TCTTCTGTAT CAACGGACCT GAGATCATGT CCAAACTGGC TGGTGAGAGT GAGAGCAACC TCAGGAAAGC ATTTGAGGAG GCTGAGAAAA ATGCCCCTTC AATCATATTC ATTGATGAGA TTGACTCTAT TGCACCCAAA AGAGAGAAGA CGAATGGCGA GGTTGAGAGG AGGATTGTGT CTCAGCTGCT TACGCTTATG GATGGACTGA AATCGCGTGC TCATGTTATT GTCATGGGAG CAACCAATCG CCCCAACAGT ATCGACCCAG CTTTGAGAAG GTTTGGAAGA TTTGACAGGG AGATCGATAT TGGGGTTCCT GACGAAATTG GACGTCTTGA AGTTCTGAGG ATCCATACAA AGAACATGAA GCTTGCTGAA GATGTGGATC TCGAAAGGAT CTCAAAGGAT ACACACGGTT ACGTCGGCGC TGATCTTGCA GCTTTGTGCA CAGAGGCCGC CCTGCAATGC ATCAGGGAGA AGATGGATGT GATTGATTTG GAAGATGACT CCATAGATGC TGAAATCCTC AATTCCATGG CAGTGACTAA TGAACATTTC CACACTGCTC TCGGGAACAG CAACCCATCT GCACTTCGTG AAACTGTTGT GGAAGTTCCC AACGTCTCTT GGAATGATAT TGGAGGTCTT GAGAATGTCA AGAGAGAGCT TCAGGAGACT GTTCAATACC CAGTCGAACA CCCAGAGAAG TTTGAGAAAT TCGGGATGTC TCCATCAAAG GGAGTACTTT TCTACGGTCC TCCTGGATGT GGGAAAACTC TTTTGGCCAA AGCTATTGCC AACGAGTGCC AAGCTAATTT CATCAGTGTC AAGGGTCCCG AGCTTCTGAC GATGTGGTTT GGAGAGAGTG AAGCGAATGT CCGTGAAATC TTCGACAAGG CCCGTCAATC CGCTCCATGT GTTCTTTTCT TCGATGAGCT TGACTCCATT GCGACTCAGA GAGGAGGCGG AAGTGGAGGC GATGGAGGCG GCGCTGCGGA TAGAGTGTTG AACCAGCTTT TGACTGAGAT GGATGGAATG AACGCCAAGA AAACTGTCTT CATCATTGGA GCAACCAACA GACCTGACAT TATCGATTCG GCTCTTCTCC GTCCTGGAAG GCTTGACCAG CTCATTTACA TTCCACTACC AGACGAGGAT TCCCGTCTCA ATATCTTCAA GGCCGCCTTG AGGAAATCTC CTATTGCTAA AGATGTTGAC ATCGCTGCAC TCGCTAAATA CACTCAGGGA TTCAGTGGTG CTGATATCAC TGAGATTTGT CAGAGAGCTT GCAAGTACGC CATCAGAGAA AACATTGAGA AGGACATTGA AAAGGAGAAG AGGAGGAGCG AGAACCCAGA GGCAATGGAG GAAGATGGAG TGGATGAAGT ATCAGAGATC AAAGCTGCAC ACTTTGAGGA GTCGATGAAG TATGCACGTA GGAGTGTGAG TGATGCAGAC ATCAGGAAGT ACCAAGCTTT TGCTCAGACG TTGCAGCAGT CTAGAGGGTT CGGTTCTGAA TTCAGGTTCG AGAATTCTGC TGGTTCAGGT GCCACCACTG GAGTTGCAGA TCCGTTTGCC ACGTCTGCAG CCGCTGCTGG GGACGATGAT GATCTCTACA ATTAGTGATA ACTTCATTAT CCTTTTTTTT TATATTAAGT TTAAAACTCG AATTCTCTAC TTTTGGATTA CTGGGGAAAG TGATACTGAT TCTTTCCTCG TGTTTTTAAG TTATCCGAAT TTCTTGTGAT TGGGTTTTAA TCAATGTTCT TAATTTTCGT TTCATTCCTT ACAAATGGAA AA |
| Length | 2732 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 3656510.. 3660154 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G09840.1 |
| Description | cell division cycle 48 |
| TAIR curator summary | Encodes a cell division cycle protein, a member of AAA-type ATPases gene family. Expressed throughout the plant in regions of cell division. Within the cell, sub-cellular localization varies depending on the stage of the cell cycle.Mutants in which the expression of CDC48A is altered show defects in cytokinesis, cell expansion and cell differentiation. |
| Alias | [ATCDC48][CDC48][CDC48A][cell division cycle 48] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.73205 |
Ahg939446 | transducin family protein / WD-40 repeat family protein |
| 2 |
Ahg903021 | auxin transport protein (BIG) |
| 2.23607 |
Ahg940290 | mRNA splicing factor, thioredoxin-like U5 snRNP |
| 2.44949 |
Ahg495156 | CLPC homologue 1 |
| 3 |
Ahg935788 | sister-chromatid cohesion protein 3 |
| 3.4641 |
Ahg478716 | proteasome activating protein 200 |
| 3.60555 |
Ahg482666 | glucan synthase-like 8 |
| 3.74166 |
Ahg478733 | evolutionarily conserved C-terminal region 2 |
| 4.47214 |
Ahg891774 | |
| 4.89898 |
Ahg943823 | HEAT repeat ;HECT-domain (ubiquitin-transferase) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|