Detail


ID : Ahg331646

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|331646|fgenesh1_pm.C_scaffold_8000989
Sequence
ATGGAGAGAT ACCAAAATCT AATGGTAGGA GAAGCTTTAT CGAAGAATCG TCTTTACCCA TTTGCTTGCA ATGAACTAAG CTCCATTTTG AATCTTGCTT ACTCTCGATT ACCCAAAAAT GTCAAAGCTT TGATCTTTCG AGATACCCTC TCCGCTTTTC GTCTTCTTCC CGACATCAAT ACATCAGCTG CTGTTTCAGC CGCTAACCTT CTCCTGAAGA GCGTAGAAGC TGTGCTCCCT AAACAGAAGA AGAATTTAGC CATTGTAGAA TTCAAGCAGG CAAAAGTAGC ACTAAAGAGA CGCAGTAAGA GCTGTGAGGA AAAAGATATA GATATACCTT CACTTCCACA AGATATCCTT ATTCACATCT TCAGTTTCCT CGATGTATCG TCCTTACTTT CCTCAGCTCA AGTATCTCGC TCATGGAACT AAGCAACGCA TGAGAACTCT CTGTGGCAAA CACAATTTGA CCTTCACTTC AATCAAAAAG TCTTGATTCG TATTCAGTCC GGTATTGACT GGAGAGAAGC CTTTAAAAAA GCATATATCG CGGCTAATTC ATCAAAGGCG TTGAGATCTG GTCGGGGATA CTGCAGTTAC TGTGATTCTA TTGTTTGGCA CGACGACTTG AGATGTGCAA ACAAACAATG TCGGTTGAAA TCAGGCAACA AGCCACTGGA CCTCATATCA ACTCACCAGG TTGTCAACTA CTTACTGGGA ATAGAGAGTT CTGATGATGA AAGCGAATCA GACGATGAAG CCTATCCTGG ACGACTATGG AAACTTTCTT ACGTATAA
Length798
Protein Sequence
Protein Residue
Map Locationscaffold_8: 14408953.. 14410911
Download Sequence
A.thaliana
AGI-codeAT5G52880.1
DescriptionF-box family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.9706 Ahg926296 short hypocotyl in white light1
27.7128 Ahg482571 Mitochondrial transcription termination factor family protein
45.5192 Ahg472946 GYF domain-containing protein
69.95 Ahg944393 Transducin family protein / WD-40 repeat family protein
77.5242 Ahg932189 oxidoreductase, 2OG-Fe(II) oxygenase family protein
78.4219 Ahg930275 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region
79.8749 Ahg495972 Protein kinase superfamily protein
83.3067 Ahg898458 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression