| Annotation |
|---|
| Description | jgi|Araly1|944393|scaffold_700622.1 |
| Sequence |
AACGATTAAG GTAGAGAGTG ATGGCGGCGG AAGAGGGTAA AGATGAGCCA GGATTGGATC AGGTGGAGGA AGAGTTCTCT GTTTGGAAAA GGAACACACC ATTTCTCTAC GATCTTATGA TCTCTCACCC ACTCGAATGG CCATCTCTAA CTCTCCATTG GGTCCCTTCG ACGCCGATTC CGTACGCGAA AGATCCTTAC TTCGCCGTTC ATAAGCTTAT CCTAGGGACT CATACCTCCG GTGGTGCCCA GGATTTTCTA ATGGTCGCCG ATGTCGTTAT TCCGACACCC GACGCTGAAC CAGGGTTAGG TGGAAGAGAT CAGGAACCTA TCGTCCCTAA GGTGGAGATT AAGCAGAAGA TACGTGTTGA TGGAGAAGTG AACAGAGCGC GGTGTATGCC TCAAAAGCCA ACTCTTGTGG GTGCTAAAAC AAGTGGCTCT GAGGTGTTTT TATTTGATTA CGCCAGACTC TCTGGAAAGC CCCAAACTAG TGAGTGTGAT CCTGATCTGA GGCTAATGGG ACATGAACAA GAAGGTTATG GATTGGCTTG GAGCTCCTTT AAGGAGGGTT ATCTTTTGAG TGGGTCACAG GATCAGAGAA TCTGCCTTTG GGATGTTTCA GCTACTGCCA GTGATAAGGT TTTGAATCCA ATGCATGTGT ATGAGGGACA TCAAAGCATC ATTGAAGATG TAGCATGGCA CATGAAGAAT GAGAATATAT TCGGGTCTGC GGGTGATGAT TGTCAATTGG TTATATGGGA CTTACGGACA AACCAAATGC AACACCAAGT CAAAGTTCAC GAGAGAGAGA TAAACTATCT TTCTTTCAAT CCATTTAATG AATGGGTACT AGCCACAGCT TCCTCAGACT CGACTGTCGC CTTGTTTGAC CTTCGTAAGC TGACTGCGCC ATTACATGTC CTGAGCAGAC ACGAGGGAGA AGTTTTCCAA GTGGAGTGGG ATCCGAACCA TGAAACAGTG CTTGCATCTT CTGGCGAGGA CAGAAGACTC ATGGTCTGGG ATATCAATAG GGTCGGGGAT GAGCAGCTTG AAATAGAGTT GGATGCAGAA GATGGTCCAC CTGAGCTGCT CTTCTCTCAT GGAGGTCACA AGGCCAAAAT ATCAGACTTT GCCTGGAACA AGGACGAGCC TTGGGTCATC TCAAGTGTAG CTGAAGACAA CAGTCTTCAA GTCTGGCAAA TGGCAGAAAG CATCTACCGC GAAGATGATG AGGAATGATG ATGATGAAGG CAACCATA |
| Length | 1258 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 2366790.. 2368904 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G35050.1 |
| Description | Transducin family protein / WD-40 repeat family protein |
| TAIR curator summary | Encodes a WD-40 repeat protein similar to yeast MSI1. The predicted protein has a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase |
| Alias | [MSI3][NFC3][MULTICOPY SUPPRESSOR OF IRA1 3][NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP C 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.48528 |
Ahg935751 | SWITCH/sucrose nonfermenting 3A |
| 11.5758 |
Ahg489803 | cytosolic invertase 2 |
| 11.8322 |
Ahg328199 | MUTL protein homolog 3 |
| 13.6748 |
Ahg943440 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 14.4914 |
Ahg487058 | Spo11/DNA topoisomerase VI, subunit A protein |
| 15.3948 |
Ahg494908 | |
| 18.1659 |
Ahg490568 | ARM repeat superfamily protein |
| 21.6795 |
Ahg477786 | ARM repeat superfamily protein |
| 22.1811 |
Ahg489030 | calmodulin 6 |
| 22.7596 |
Ahg927711 | N2,N2-dimethylguanosine tRNA methyltransferase |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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