| Annotation |
|---|
| Description | jgi|Araly1|332862|fgenesh1_pm.C_scaffold_8002205 |
| Sequence |
ATGACCGGCG ATAATTCAAC GGATATTGGG CGAAGACGTA GCCGAGGGGC GGAGGCGGCG AGTCGGAAAG ACACACTCGA GCGGCTGAAG GCGATTCGAC AAGGAGGAAT TCGGTCTGCG TCAGGTGGTG GGTACGATAT TAGGCTACAG AAGCCAATCT TCGATACGGT TGATGATGAC GAGTACGATG CACTTGTTTC CCGGCGGCGC GAGGAGGCTC GCGGGTTTGT AGTTGAAGAT GGGGAAGGTG GCGATTTGGG ATATCTCGAC GAAGGTGAGG AGGAGGATTG GTCGAAGCCC AGTGGACCTG AATCGACTGA TGAATCGGAC GACGGTGGTA GGTTTAGCGG GAGACTTAAG AAGAAGAAGA AAGGGAAAGA ACAAATGCAG CAACCTCAGG TTAAGAAGGT GAATCCAGCG CTAAAGGCTG CGGCTACTAT CACTGGTGAA GGTAGACTTT CGTCTATGTT CACATCTTCG AGTTTCAAGA AGGTCAAAGA GACTGATAAG GCACAATATG AGGGTATTCT TGACGAGGTA ATAGCTCAGG TTACTCCGGA CGAGTCGGAT AGAAGAAAGC ATACGAGAAG AAAGCAACCA GGTACTGTTC CAGTTACCAT CTCCAGGAAC AAAAAACTGG TTTCTGTTAC TTCGAGTATG GAAATGAAGG AGTCAGAACC AACACCCTTA ATTTATGAGG ATGATTGTGT TTTCATGGAG AATGAGTTGA TGAAAGAGGA AGATATGAAA GAATCTGAAG TCACTCCTTC GCATAATGTT GAGAGTATGG AAGTACCTGG AAGTGATAGT GTTATAGAGG ATGAAAACAA TATAAGGAAA GCTGAGGTGA AGACGGAGTT AGGTGTTAAG GCGGTATTTA CATTGAATGC AACTATTGAT ATGAAAGAGA AGGATTCGGC TTTAAGCGCC ACTGCTGGTT GGAAGGAAGC AATGGGAAGA GGTGGAACTG AGAATGGGGC TTTACTTGGT TCTAGTTGTG AAGGGAAAAC GGAATTTGAT TTGGATGCTG ATGGATCACT TCGTTTCTAC ATTCTTGACG CTTATGAGGA GGCTTTTGGC GCGAGCATGG GCACAATATA TCTGTTTGGG AAGGTTAAAA TCGGAGATAC TTACAAGAGT TGCTGTGTGG TAGTTAAGAA TATCCAGAGG TGTGTTTATG CTATTCCAAA TGATTCCATA TTTCCTTCTC ATGAACTAAT CATGCTCGAG CAAGAGGTGA AAGACTCTCA ACTTTCTCCT GAATCCTTTC GTGGAAAGTT GCATGAAATG GCATCAAAAC TGAAAAACGA AATTGCTCAG GAATTGCTAC AACTCAATGT TTCAAATTTT AGCATGGCGC CTGTCAAGAG AAACTATGCT TTTGAGAGGC CTGATGTGCC TACTGGCGAA CAATATGTTA TGAAGATAAA TTATCCATTT AAGGATCGTC CACTTCCAGA AGATCTTAAA GGCGAGTCTT TCTGCGCTTT GCTCGGGTCT CATACCAGTG CTTTGGAGCA TTTTATCCTT AAGAGGAAGA TCATGGGACC TTCTTGGCTC AAAATTTTAA ACTTCTCTAC TTGCTCACCT TCTGTAGGAG TGAGCTGGTG CAAGTTTGAG GTTACTGTTG AATCTCCCAA GGATATCACT GTTTTAGTTT CGGAGGAAAA GATGGTTCAC CCTCCTGCTG TCGTTACAGC CATAAATTTA AAGACCATAG TCAATGACAA ACAGAACATA AGCGAAATCG TTTCTGCATC TGTTCTCTGC TTTCACAACG CCAAGATTGA GGTTCCAATG CCAGCTCCAG AAAGGAAGAG ATCTGGTATT CTGAGTCATT TCACAGTTGT TAGAAATCCT GAAGGAACCA GTTACCCAAT TGGTTGGAAA AAAGAAGTGG CTGACAGAAA TTCAAAGAAT GGCTGCATTG CTTTAAGTAT TGAAAACAGT GAAAGAGCAT TGCTGAACCG ATTGTTTTTG GAGTTGAACA AATTGGACAG TGATGTTCTT GTGGGACATA ATATATCAGG TTTTGATCTG GATGTTCTTC TTCAAAGAGC CCAGGCTTGC AAAGTTCAGA GTAGCATGTG GTCCAAAATT GGCCGACTCA AACGCTCTTT CATGCCTAAG CTTAAAGGAA ACACTAATTT TGGGTCAGGA GCTACACCAG GACTCATGTC TTGTATTGCT GGAAGGCTCT TGTGTGATAT AGATCTGTGT TCTCGTGAAT TGTTGAAGCA GGTCAGTTAT TCATTAACAG ACCTTTCAAA GACACAGCTG AACCGGGACA GGAAAGAGAT AGCGCCTAAT GATATTCCCA AAATGTTTCA GTCATCCAAA ACACTTGTGG AACTTATTGA ATGTGGTGAA ACGGATGCAT GGCTGTCCAT GGAGCTCATG TTTCATCTAA GTGTTCTTCC TCTCACACTC CAGCTTACTA ACATAAGTGG CAATCTTTGG GGGAAAACAC TTCAAGGAGC CAGGTCGCAG AGAATCGAAT ACTACTTACT ACATACATTC CACTCGAAAA AGTACATTCT CCCAGACAAA ATTTCACAAC GTATGAAGGA AATAAAGTCA TCAAAAAGAA GAATGAATTA TGGTCCAGAG GACCGCAATG TAGAGGAATT GGATGCTGAC CTGGCTTCGG AGAATGATCC GTCTAAGGGC AGCAAAACAA AAAAAGGTCC AGCCTACGCT GGTGGACTGG TCTTGGAGCC AAAGAGAGGC TTATATGATA AATATGTGTT GCTTCTGGAT TTCAATAGTC TTTACCCTTC TATTATACAG GAATACAATA TCTGTTTTAC GACTATACAA CGATCAGAAG ATGGAGTTCC TCATTTACCT TCGAGTCAAA CACCTGGAGT TCTTCCAAAG TTGATGGAAC ATTTGGTCAG TATAAGGAAA AGCGTCAAAT TAAAGATGAA GAAGGAAACA GGTCTCAAGT ACTGGGAGCT TGACATTCGG CAGCACGCAT TAAAGCTCAC AGCTAATAGT ATGTATGGAT GTCTGGGGTT TCCTAATTCA AGATTCTATG CTAAGCCTTT AGCAGAGCTC ATAACACTAC AGGGAAGGGA GATCCTGCAA AGAACTGTGG ATCTTGTCCA GAACCATTTA AACCTAGAGG TAATATACGG TGACACAGAT TCAATCATGA TTCACAGCGG ACTAGATGAT ATCGAAGAGG TGAATGCCAT TAAATCAAAA GTCATCCAAG AGGTCAATAA GAAGTATAGA TGTCTAAAAA TTGACTGTGA TGGCATATAC AAGAGAATGC TTCTTCTTCG AAAAAAGAAG TATGCTGCTG TCAAGTTGGA GTTTAAGGAT GGGAAGCCTT GCGAGGACAT TGAAAGAAAA GGTGTGGATA TGGTTCGTCG AGATTGGAGC TTACTCTCTA AGGAAATAGG AGATTTATGC CTGAGTAAAA TCTTGTATGG AGGGTCGTGT GAGGATGTTG TTGAAGCAAT TCATAACGAA CTAATGAAGA TAAAGGAGGA AATGAGAAAT GGGCAAGTTG CGCTTGAGAA GTATGTCATC ACCAAGACAT TGACTAAACC GCCTGCAGCT TATCCAGATT CCAAAAGCCA ACCACATGTT CAAGTTGCAC TCAGAATGAG GCAACGTGGT TATAAAGAAG GTTTCAACGC TAAGGATACT GTACCGTATA TAATCTGCTA TGAACAGGGT AATGCTAGCT CTGCTAGTTC AGCAGGAATT GCCGAACGCG CTAGGCATCC TGATGAGGTG AAATCAGACG GCAGCAGATG GTTGGTTGAC ATAGATTACT ACCTGGCACA ACAGATTCAT CCGGTGGTGT CTCGTCTATG CGCAGAAATT CAAGGAACAA GTCCTGAACG TCTAGCTGAG TGTTTAGGAC TTGACCCATC AAAGTACCGA AGCAAATCAA ACGATGCTGC GAGCAGTGAT CCTTCTACCT CCCTCTTATT TGCTGCAAGC GATGAAGAAA GACCTGCAAC ACCTGAAACA GAGGATTCTG ATTCCACATT CTGGCTTAAA CTGCATTGCC CGAAATGTCA GCAGGAAGAT AGCACGGGAA AAATATCCCC TGCAATGATA GCTAACCAGG TGAAAAGACA GATTGATGGA TTTGTGTCAA TGTATTACAA AGGCATAATG GTGTGTGACG ATGAGTCTTG CAAGCACACG ACCCGCTCCC CCAACTTTCG CCTGCTTGGT GAACGTGAAC GGGGGACAGT TTGCCCAAAC TATCCTAACT GTAACGGAAC CCTGTTACGA AAGTACACTG AAGCAGACTT GTACAAGCAA CTGTCATACT TCTGCCACAT CTTAGACACA CAACACTCTC TAGAAAAGAT GGATGTTGGC ATGAAAATTC AAGTAGAGAA AGCAATGACG AAGATAAGAC CTGCGGTTGA GTCAGCAGCA GCCATCACTC GAAGTAATAG AGACCGGTGT GCTTATGGAT GGCTGCAACT CACAGACATA GCCATTTGA |
| Length | 4479 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 21102936.. 21111533 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G67100.1 |
| Description | DNA-directed DNA polymerases |
| TAIR curator summary | Encodes the putative catalytic subunit of the DNA polymerase alpha. Interacts with genes involved in chromatin-mediated cellular memory. ICU2 genetically interacts with TERMINAL FLOWER2, the ortholog of HETEROCHROMATIN PROTEIN1 of animals and yeasts, and with the Polycomb group (PcG) gene CURLY LEAF. A number of regulatory genes were derepressed in the icu2-1 mutant, including genes associated with flowering time, floral meristem, and floral organ identity. Mutant has curled, involute leaves and causes early flowering. |
| Alias | [ICU2][INCURVATA2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.3589 |
Ahg484805 | Spc97 / Spc98 family of spindle pole body (SBP) component |
| 6.16441 |
Ahg487869 | Histone superfamily protein |
| 8.83176 |
Ahg487923 | L-Aspartase-like family protein |
| 9.16515 |
Ahg927425 | chromomethylase 1 |
| 9.74679 |
Ahg331330 | methyltransferase 1 |
| 16.4924 |
Ahg496254 | Replication factor-A protein 1-related |
| 18.412 |
Ahg919092 | myosin XI B |
| 22.8473 |
Ahg932330 | Plant protein of unknown function (DUF869) |
| 25.7488 |
Ahg471009 | Histone superfamily protein |
| 26.1534 |
Ahg491403 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|