| Annotation |
|---|
| Description | jgi|Araly1|927425|scaffold_202986.1 |
| Sequence |
AGCTTTCTCC GATTACGCGA AAATGGCAGT GAAAAACAAA CAGATGAAAC GCGCTGAGCC AGAGTCAGAT CTGTGTTTTG CTGGGAAACC AGTGTCTGTT GTCGAGTCGA TGATTCGATG GCCTCATCGC TACCCATCCA AGAAAACAAA GCTTGAAGCT GCGACGGCGA CGAAGGGTGA CAAAAAGGAA AAGATAAAGC TAGCGAAACG TCACTACGAG CAAGCTTTGG TTGATGGAGT TCTCATCAAC CTCAATGACG ATGTCTACGT CACGGGTCTA CCAGGGAAGC TGAATTTCAT TGGAAAAGTT ATTGAAATGT TCGAAGCAGA TGATGGGGTG CCTTACTCTC GGATTCGATG GTTTTACAGA CCCGATGATA CTTTGATCGA AAGATTTGCC GAACTTGTGC AAAAAAAGAG GGTGTTTCTA TCAAATGTTG AGGACGATAA TCCTCTCACC TGCATTTATT CGAAAGTCAA CATCGCTAAA GTCCCATTAC CAAAGATTAC CTCCAGAATC GAGCAAAGGG TTATTCCTCC ATGTGACTAT TACTATGATA TGAAGTACGA AGTGCCATAT CTGAATTTTA CAAGTGCAGA TGATGATACT GCTGCGTCAT CAACTCTTTC AAGTGATTCC GCCTCGAATT GCTTTGAAAC TCTCCACAAA GATGAAAAAT ATTTATTGGA TCTGTACAGT GGATGCGGAG CGATGTCCAC AGGTTTCTGC ATGGGAGCTT CCATAGCAGG AGTAAAATTG ATTACGAAAT GGTCTGTGGA TATAAATAAG TTTGCTTGTG ATAGTTTTAG ACATAATCAT CCTGAAACAG AGGTGAGAAA TGAAGCTGCA GAAGATTTTC TAATTCTCCT CAAAGAATGG AAAAGGCTCT GTGAAAGGTT TTCTCTCATT TCAAGCACTG AACCAATGGA ATCAACTTCT GAGTTGGAAG ATGAAGAAAG TGACGAAAAT GATGACATAG ATGAGGCAAG TACTGGTATG GAACTCTCAG CGGGAGAGTT TGAAGTAGAA AAGTTTGTTG GCATCGTTTT TGGAGATCCT AAAGGCACAG GGGAAAAGAC ACTTCATCTT AAGGGTACTG TTTACTCTGT GTGCGGTGGG CCACCCTGCC AAGGGATCAG TGGCTATAAC CGGTTTAGAA ACAAACAAGC ACCGCTTGAG GATAAGAAAA ACCAGCAACT TTTGGTGTTT TTAGACATCA TTGACTTCCT CAAGCCAAGT TACGTGCTTA TGGAAAATGT TGTAGACCTT CTTAGGTTTT CAAAGGGTTA CCTGGCACGT CATGCTGTGG CTAGCTTTGT TGCCATGAAT TACCAGACGC GGTTGGGCAT GATGACTGCT GGATCCTACG GTCTCCCTCA GGTTAGAAAC AGGGTTTTTT TATGGGCCGC ACAACCAACA GAGGATTTAC AAGTTGGACT TGTTCAAAAG GAGCTTCTTC AATTAGACAA CGCTCTTACG CTGGCTGATG CTATTAGTGA CCTACCACCG GTGACAAATT CTGAGGCAAA TGATGTAAGG AATTATAATG ATGCTGCTCC TAAGACAGAT TTTGAGAACT TTATTAGCCT TAAAAGATCT GAGACACTAT TACCCGTATG TGGTGGAGAT CCGGCACGCA GGTTGTTTGA TCATCAGCCT CTTGAATTAA GAGATGACGA CTTGGAAAGA ATTTCCTACA TACCAAAAAA GAAGGGGGCA AATTTTCGTG ATATGCCTGG TGTTTTAGTT CACAACAACA AAGCGCAACT TAACCTTAGG GTGAAGCGAG CAAAGTTAAA ATCTGGAAAG AATGTGGTCC CTGCTTATGC AGTTTCATTC ATAAAAGGAA AATCAAAAAA GCCTTTTGGT AGATTGTGGT GGGACGAAAT AGTTAACACG GTTGTGACAA GGGCAGAACC TCACAACCAG TGCGTAATCC ATCCAATGCA AGAGCGTGTG TTGTCTGTCC GTGAGAATGC CAGACTACAA GGGTTCCCTG ATTGTTACAA GCTTTGTGGC TCAATTAAGG AAAAGTACAT CCAGGTTGGG AATGCAGTGG CAGTTCCTGT AGGGGTTGCG TTAGGATATG CATTTGGTAT GGCGAGTCAA GGACTGACGG ATGATGAGCC TGTAATCAAG CTGCCCTTCA AGTACCCTGA ATGCATGCAG GGGACAAACT TTGAATTTTT GTCTGCACTT GGGAATGTGT CCAAGGATAC CGGAATAGTT ACTTCCATGA TAGTCAATTC CACTCGCGAC TTCGAAGCAA GGGTTCAGTA TAATGAGGTT GAGAAGAAAC GTTGCTCGAC TATGATTGCA ACGCTCTGCA GGTTTAAGCC GCCGCAAACT CCAGAGGAGG TGGAAGGCGA CCTATGTGCG GCCTTTGACA GACTTTCCGT GGATGATTTC TTCAAAGGTG ACATGCCCGA TTGGGTGCCT GAGGATGCAC TAACTGCCAG TGATAATCTG CAATACTACG AGGAAAAACT GCAGTGGGCA CAGCCATTTG AGCTGAGAAA GATAATTGTA CAAACCAGAG AAGATGTGGA GTCGAAGAAG TGGGCCAAGG CGGAGAATGC AATCTTACAT TGCCTTCAAA AGCCGTGGCT CCCGTCGAGA CTACAATGCT ATCATAAGGA GAACAATGGA TGGAACGCCA GAGCGTCGCT TGA |
| Length | 2673 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 17825620.. 17832675 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G80740.1 |
| Description | chromomethylase 1 |
| TAIR curator summary | ecotype Kl-0 chromomethylase (CMT1). A plant line expressing an RNAi construct directed against DMT4 has reduced agrobacterium-mediated tumor formation. |
| Alias | [CMT1][DMT4][chromomethylase 1][DNA METHYLTRANSFERASE 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.77496 |
Ahg490375 | Minichromosome maintenance (MCM2/3/5) family protein |
| 9.16515 |
Ahg332862 | DNA-directed DNA polymerases |
| 9.79796 |
Ahg331330 | methyltransferase 1 |
| 11.6619 |
Ahg938344 | GHMP kinase family protein |
| 13.2665 |
Ahg350051 | glucan endo-1,3-beta-glucosidase-like protein 3 |
| 14.4914 |
Ahg494345 | Minichromosome maintenance (MCM2/3/5) family protein |
| 16.4924 |
Ahg471685 | O-fucosyltransferase family protein |
| 23.7697 |
Ahg470918 | syntaxin of plants 111 |
| 25.3377 |
Ahg471009 | Histone superfamily protein |
| 26.0768 |
Ahg470351 | targeting protein for XKLP2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|