| Annotation |
|---|
| Description | jgi|Araly1|332974|fgenesh1_pm.C_scaffold_9000002 |
| Sequence |
ATGGGTTCTT CTCATATTCC TCTTGATCCG TCTCTAAATC CGTCACCTTC ACTGATCCCA AAGCTTGAAC CAGTCACTGA ATCAACCCAA AACTTGTCCT TTCAACTTCC AAACACAAAC CCACAAGCCC TAATTTCATC ACCCATCTCC AATTTCAACG AAGCCACAAA CTTTTCCTCA GATTACAACA CCGTCGCCGA GACATTCCGG TCCGCTTTCG CTCAACGTCT TAAACGTCAC GATGATGTTA CGGTTCTTGA TTCCTTAACC GGAGCAATTG TACCGGTTGA GGAGAATCCA GACCCGGAAC CGATTCCGGT TTCTTACTCA ACCAATGACG CTTCACCGTC GGTTGTTGTT ACTCGACGGC CTAAGCCACA GCAACGTTCG TCGGAGCTAG TGAGGATCAC TGATGTTGGA CCTGAAGGTG AGAGACAGTT TCGTGAACAT GTGAGGAAGA CGAGAATGGT TTATGATTCA CTTAGGATGT TCTTGATGAT GGAAGAAGTT AAACTTAATG GGTTTGGTGG AAGAAAAGGT AGACCTGATA GTAAAGCTGC TTCAATGATG AAAGATTGTA TGTTATGGTT GAATCGTGAT AAACGAATCG TCGGTTCGAT TCCCGGTGTT CAAGTTGGGG ATATCTTCTT CTTTAGGCTT GAGTTATGTG TTATGGGTTT ACATGGGCAA ACACAAGCTG GGATTGATTA TCTTACAGGG AGTCTTAGTT CTAATGGAGA GCCAATTGCT ACTAGTGTGA TTGTTTCAGG TGGTTATGAG GATGATGATG ATCAAGGAGA TGTGATTATG TATACAGGTC ATGGTGGGCA AGATAAGCTT GGAAGGCAAG CTGAACATCA GAAGTTGGAA GGTGGGAATC TTGCGATGGA ACGGAGTATG TATTACGGGA TTGAAGTTAG GGTGATTAGA GGGTTGAAGT ATGAGAACTC GGTTTCTAGT AAAGTTTATG TTTATGATGG GTTGTTTAGG ATTGTTGATT CTTGGTTTGA TGTTGGGAAA TCTGGTTTCG GTGTGTTTAA ATATAGGCTG GAGAGGATTG AAGGGCAGGC TGAGATGGGT AGTTCGATTT TGAAGCTTGC TAGGACTCTT AAGACTAATC CATTGTCTGT GAGACCGAGA GGTTATATCA GTTTTGATAT CTCGAATAGG AAGGAGAATG TTCCTGTCTA TTTGTTTAAT GATATTGACA ACGATCAAGA ACCTTTGTAT TATGAGTACC TTGAGACAAC TTCGTTTCCT CCTGGTTTAT TTGTTCAACG GAGTGATAGT GCAAGTGGAT GTGACTGTAT CAAAGGTTGT GGCAGTGGCT GCCTTTGTGA AGCCAAGAAT TCAGGTGAGT TTGCTTATGA TTATCATGGG AAGTTAATAA GACAGAAACC GTTGATACAT GAATGTGGAC CGGCGTGTCG GTGCCCTCCA AGCTGTCGAA ACCGTGTGAC TCAAAAGGGT TTGAGGAATA GACTAGAAGT GTTTAGGTCA CTGGAAACGG GTTGGGGAGT TCGGTCTTTG GATATATTAC ATGCTGGTGC TTTTATTTGT GAATATGCTG GGGTTGCTTT GACAAGAGAA CAAGCCAACA TTCTGACCAT GAACGGTGAT ACATTGGTAT ATCCTGCTCG GTTTTCCTCT GCGAGATGGG AAGGTTGGGG AGATTTGTCT CAGGTCCTGG CTGATTTCGA GCGTCCTTCT TATCCTGAGA TTCCTCCTGT TGATTTCGCA ATGGATGTGT CCAAGATGAG GAATGTTGCT TGTTACATAA GCCACAGTAC TGATCCGAAT GTCATTGTCC AGTTAGTACT CCATGATCAC AACAGTCTGA TGTTCCCTAG AGTCATGCTT TTTGCTGCTG AAAACATACC TCCCATGACT GAGCTCAGCC TTGATTACGG AGTAGCTGAT GATTGGACAG CCAAGCTTGC CATTTGTAAT TAA |
| Length | 1953 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_9: 158551.. 160503 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G13460.1 |
| Description | SU(VAR)3-9 homolog 9 |
| TAIR curator summary | Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation. |
| Alias | [SDG22][SET22][SUVH9][SETDOMAIN GROUP 22][SU(VAR)3-9 homolog 9] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 10.6771 |
Ahg910750 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| 10.8628 |
Ahg492696 | tobamovirus multiplication 1 |
| 20.567 |
Ahg889863 | PAS domain-containing protein tyrosine kinase family protein |
| 39.6106 |
Ahg476891 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain |
| 42.8486 |
Ahg491823 | DERLIN-1 |
| 57.0614 |
Ahg925020 | DC1 domain-containing protein |
| 57.1839 |
Ahg476423 | Survival protein SurE-like phosphatase/nucleotidase |
| 59.5987 |
Ahg475028 | Cystatin/monellin superfamily protein |
| 66.873 |
Ahg898177 | MMS ZWEI homologue 3 |
| 73.212 |
Ahg478844 | phosphatidylinositol-4-phosphate 5-kinase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|