Detail



ID : Ahg333554

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|333554|fgenesh1_pg.C_scaffold_1000119
Sequence
ATGGAGGATT TGGTGGGATA TGGATTCCGT CCGACGGATG ATGAGCTCGT AGGTTACTAT CTCCATAACA AAATTCTGGG AAAGAATTGG CTAGTAGAAG GAGCCATTAA CGAGGTCAAC ATCTGTAGCT TCGATCCATG GAACTTGCGC TTCCAATCTA AGATAAAATC GAGAGATCCT ATGTGGTATT TCTTCTCTCG AAGAGAAAAC AAGTACACCA ATGGGAATCG ACAGAGCAGG ACAACAGATT CTGGCTTCTG GAAGGTTACT GGAGAGCCTG TGGATGTCAA GGATCAGTGG GGAACTTGGT GTACCACTCC TGGTAAGATT GGTCATAAAA GGGTTTTGGT CTTCCTCAAG GGAAGAATCT CTGACAAAAC CAAATCTGAT TGGGTTATCC ACGAGTTTCA CGACGACCTC TTACCAGAAC ATCAGAGGAC CTATGTCATC TGCAGACTTG AATATAAGGG CAACGACAAG AGCATTCTAT CTGCCAACGC AACAGATCCC ACTCCCACTT TTGTCCCTAA TATGACTAGT AGTGCAGGTT CTGTGGTCAA CCAATCACGT CAAGGAAATT CAGCATCTTA CAACACTTAT TCTGAATATG ATTCAGCAAA TCATGGCCAG CAAAACTTCA ACATGCAGCT ACCAGTTCAA GGAAATTTAG GGTCTCTTAA CCATTTCTCT GAGTATGACT CAGCAAATCT TGGTGGAAAC TTTGACATGC AGCAACCAGT TGAAGGATAT GCAGGATCTT TTAACCCTCT CCTTGAGTAT GATTTAGCAA ATCACGGTGG TCAGTGGTTG AGTGACTATA TCAACCTACA ACAACAAGTT CCTTACTTGG CCCCTTATGA AAATGAGTCG GAGATGATTT GGAAGTCTGT GGTTGAAGAA AATTTTGAGT CTTTAATTGA TGAAAGGACA TCTATGCAAG AGCATTACAG TGATTACCGG CCAAAAAAAC CTGTGACTGG GGTTTTGCCT GATGATAGCA GTGATACTGA AATTGGCTCA ATGATTTTCG AAGACACTTC AAGCTCGACT GATAGTGTTG GTAGTTCAGA TGAACCGTGC CATACTCCTA TAGATGATAT TCAACCATTG AACACTAGTA AGCCTTCGCA CAATTATGAG GCACAAGAGC AACCAAAGCA GTTGAAATTG CCGTATCAGA ACAAAGAAAA GGTGATATAT TCTCAGAAAA GCGAATACGA GTGGAAAATG GCTGAAGACT CGATCAAGAA ACCTCTATCC AACAACACGG TGAAGCAGAG CTGGATTGTT TTGGAGAAGA GGAGTCAAAG GAATGCACAG TGGAACTATC TCAAGAACAT GATCATTGGT GTCTTGTTGT TCATCTCCAT CATTGGTTCG ATCATTCTGG TTGGTTAA 
Length1398
Protein Sequence
Protein Residue
Map Locationscaffold_1: 499000.. 501030
Download Sequence
A.thaliana
AGI-codeAT1G01010.1
DescriptionNAC domain containing protein 1
TAIR curator summary
Alias[ANAC001][NAC001][NAC domain containing protein 1]
Gene coexpression
MR
MR Locus Description
12.6491 Ahg894415 CBL-interacting protein kinase 25
18.4932 Ahg327396 WRKY family transcription factor
18.7617 Ahg922994 related to AP2 1
30.5941 Ahg490342 sucrose synthase 3
38.4708 Ahg942923 UDP-D-glucose/UDP-D-galactose 4-epimerase 5
39.5095 Ahg333508 Late embryogenesis abundant protein
49.6991 Ahg330043 Chlorophyll A-B binding family protein
50.3786 Ahg489834 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
50.8331 Ahg941255
52.9906 Ahg947410 glutamine synthase clone R1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression