Detail



ID : Ahg488271

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488271|fgenesh2_kg.6__1405__AT3G46610.1
Sequence
ATGCAAGCTT TAAGCATTTG GCCATTAAAG TCTGGTCTTT TAGTTGGATC GAGATTGGAA TTTGAGTTGG ATTGTTCTTG TTTTGTAGTT AGTCATAAGT CTAGAAAGAG GCATTGTTCT GCTGAACAGG GTTGCTTTGG TAGAATCTCT AGCTTGATCT TGGTTTCGAG TAATAGGAAA TTTGAAGGTT TGGCCGTTAA TCCTACCTCG AAAGTTCTGT TTCTGTGTGA GCCAAAGAGA AATTTGTCGG GATCATCGGT CGGGGTGGGA TGGGCCACGG AGCAACGGGA GCTCGGGGAA GAAGTTTCCA CGGAAGATTC AAGTTATCCA CAAACTGTAA ATGGAGGAGA AAAAACCAAT TCAAGAGTTG ATGTTAGAGA ATTGGCGTAT AGTTTACGAG CTGCTAAGAC AGCAGATGAT GTGGATGTTG TTCTCAAGGA GAAGGGAGAA TTACCTCTAC AAGTCTATTG TGCTATGATT AGGGGTTTTG GCAAGGACAA GAGACTGAAG CCTGCGATAG CTGTAGTAGA TTGGCTTAAG AGGAAGAAGA GTGAATCAGG CGGTGTCATA GGTCCAAACC TTTTTATATA TAACAGCCTT TTGGGTGCGA TGAAACAGTC GAGTGTTGGG GAAGCAGAGA AGATACTGAG TGATATGGAG GAAGAAGGGA TTGTTCCAAA CATTGTTACT TACAATACTT TGATGGTTAT TTACATGGAG GAAGGGGAGT TTCACAAGGC CCTTGGGATT CTTGATTTAG TCAAGGAAAA AGGTTTTGAG CCTAACCCGA TAACATATTC AACGGCTTTG CTTGTCTACA GAAGAATGGA AGACGGTATG GGAGCTCTCG AGTTCTTTGT TGAATTGAGA GAGAAATACT CAAAGAGGGA AATAGGGAAT GACGCCGATT ACGATTGGGA ATTTGAGTTT GTTAAGCTCG AAAATTTCAT TGGTAGAATA TGCTACCAAG TGATGAGGCG GTGGCTGGTG AAAGATGAAA ACTGGACTAC TAGAGTGTTG AAGCTTTTGA ATGCAATGGA CAATGCGGGT CTTAAACCGA GTAGGGAAGA GCATGAGAGG CTTATATGGG CATGTACGCG TGAAGAACAT TATATTGTTG GTAAAGAGTT GTATAAAAGA ATCAGAGAGA GGTTTCCTGA GATAAGTCTA TCTGTCTGCA ACCATTTGAT TTGGCTGATG GGTAAGGCTA AGAAATGGTG GGCAGCGTTA GAGATCTACG AGGATCTTCT TGACGAAGGA CCTGAACCGA ACAATTTGTC TTACGAATTA GTGGTCTCTC ATTTCAATAT TTTGCTGAGT GCAGCTAGTA GGAGAGGGAT ATGGAGATGG GGAGTTAGGC TACTTAACAA AATGGAAGAT AAAGGATTGA AACCGCAGAG CAGACATTGG AACGCGGTTC TTGTAGCATG TTCAAAAGCC TCTGAGACCA CAGCTGCGAT CCAAATCTTT AAAGCAATGG TTGACAATGG TGAAAAGCCA ACGGTAATCT CATACGGTGC GCTGCTTAGT GCTCTTGAGA AAGGGAAGTT ATATGATGAG GCGTTTCGAG TTTGGAACCA TATGATTAAG GTAGGTATTG AGCCAAATCT TTACGCGTAC ACGACAATGG CTTCAGTTTT GACAGGACAG CAAAAATTCA ATCTTTTGGA TACCCTTCTC AAGGAAATGG CATCAAAAGG TATTGAGCCG AGCGTTGTGA CTTACAATGC GGTTATAAGC GGTTGCGCGA GGAACGGGTT AAGTGGGGTG GCTTACGAGT GGTTTCACAG AATGAGAGGT GAGAAGGTCG AACCTAATGA GATAACCTAC GAGATGTTGA TCGAGGCTCT TGCGAATGAT GCAAAGCCAA GGCTTGCTTA TGAGTTACAT TTAAAGGCTC AAAACGAAGG GCTAAAGCTC TCTTCTAAGC CATACGACGC GGTTGTTAAA TCAGCTGAGA CTTATGGAGC CACCATTGAT CTTAATCTGT TGGGTCCTCG ACCACACAAA GAGAAGAGAG CTTAGTCTGA TACAATATTG AGATCCAATG TTACCGTGGG GTAAGGCACA TCCAAGGACT CTTAAAGGCA AGAAAATTGC CATTGCAGGG AAGAAGAAAG TTTCCAAGTA ATCATCTTCT TGATTTCCTT CTTGTTCTGT AATACTCTTT TTAGTTT 
Length2177
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5565961.. 5579066
Download Sequence
A.thaliana
AGI-codeAT3G46610.1
DescriptionPentatricopeptide repeat (PPR-like) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4 Ahg942945 SPA1-related 2
8.48528 Ahg496115 methyl-CPG-binding domain 7
8.77496 Ahg922878 SEUSS transcriptional co-regulator
9.05539 Ahg474174 Saccharopine dehydrogenase
10.1489 Ahg928272 Tetratricopeptide repeat (TPR)-like superfamily protein
13.8564 Ahg315447 ILITYHIA
14.2829 Ahg472512 Tetratricopeptide repeat (TPR)-like superfamily protein
15.4919 Ahg483374 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
15.8745 Ahg909652 HOPW1-1-interacting 1
15.9687 Ahg492161 chloroplast sulfur E
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression