Detail



ID : Ahg336969

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|336969|fgenesh1_pg.C_scaffold_1003534
Sequence
ATGGTGTTCA AGAGCAAACT CTTCTTCTCC TCGAAGAAAT CGGGATCTTC TAGTCCCAAT AGCAATAACA GTCCACGATC TGTTGGCTCT AATTCTCCGA GTGGATCCGA TAAGAAGAAA CCGAAATCAA ATTCCAAAGA GGAAACTCGG AGCCCTAATA CGAAGAAGGA TGGTTCATCA AAGGGTAAAG AAGCTTCGTT CGAAGTTCAG TCTTCTAGTC CCGGGAAATC GAACTTGTCA TCTTCTGGTT CTGAGGTGAA GAAACCAATT GTTGAAACGC CAGCGCCGTC TAACGTGAAG GAGGAATCGG CGTCGGTTTC GCCTATTATG GCTTCATCTT TGGGTTTGAA TAGAATCAAG ACGAGGTCTG GTCCGTTACC GCAGGAAACT TTTTTCGGTT TTGAGAATGA TAATGCAATT CCGGTCTTAC CGTGTTACAA GTTGTCGAAG TTGGATACTG GCAAGAAGGA AGCTGGAAGT AGCAAGCTAG AAGTTGATCA CATATCTTCT GATATTGGAC TGCTAAGAAG CAGCAATCCC GCTTTGCTGG CATCGGGAAC TGGTATGGCT TCAGATGCTC AAAATTCTCT TGATCATGTT GTTGAATGTC AATTTAAGGT ATCACCTAGC ATATCTGGCC CTGTAGGAAG CTCAGAAGTT TGCACCCTAG AGAATTCATA TGAATTGGAA GATCCAAAAG AGTCAGAATC GCCTCGTTAT CAAGCTTTAC TTCGTATGAC CAGTGCTCCA AGAAAGAGGT TTCCTGGTGA CATCAAGAGC TTTTCTCATG AGCTGAACTC GAAAGGGGTT CGGCCTTTTC CATTATGGAA GCCTCGTAGG TCAAATAACT TGGAGGAAAT CTTGAATCTA ATTCGAACCA AATTTGATAA AGCAAAGGAA GAAGTAAATT CGGACCTTTT TGCATTTAGT GGGGATCTGT TGGATATTTA TGATAAAAAC AAAGAAAGTC ATCCTGAGTT GCTGGAAACA ATTGAAGACT TGTTGGTTTT GGCAGAGACT TGTGCTAAGA CTACTTCGGG AGAGTTCTGG CTTCAGTGTG AGGGCATAGT ACAAGACTTA GATGATAGAC GTCAAGAGCT TCCTCCGGGC GTGCTCAAGC AACTTCACAC TCGGATGCTT TTTATCCTTA CCAGATGTAC CAGATTACTT CAGTTTCATA AGGAAAGTTG GGGGCAGGAG GAAGATGCCT TACAACTACG TCAGTCAAGA GTCTTGCATT CTGCCGATAA AAGAGTCCCC ACTGGAGAAG TTAGGGACGG GAGCGGTTCA AGTACTGCTA ATGCCTCAAA GGCACCATCC ACCAAGAAAG CTTATAGTCA GGAGCAGCGT GGTTTGAATT GGAACGAGGG CTTTGTTGTT CGTCCAGCTC CTCTCTCTTC TCCGTACAAA GAAATGTCAA AGGATTCTGA ATCGCCTGCA AACATCGATA AAATGTCTTC TTGGAAAAGA CTTCCATCTC CGGCATCGAA GGGTGTACAA GAAGCTGCAG TATCTAAAGA GCAGAATGAT AGCAAAGTTG AACCTCCACA GGTAGTTAAA AAGCTAGTAG CTATAAGTGA TGATATGGCT GTTGCGAAGT TGCCAGACGT TTCTTCCGCA AAATTGTCCC AGGAACATAT GCCCAAGAAT CGGCACAATA TTTCTTGGGG TTATTGGGGG GATCAGTCAT GTATCTCTGA GGAAAGTTCA ATTATTTGCC GTATATGCGA GGAGGAAATT CCCACCACCC ATGTGGAAGA TCACTCTAGA ATTTGTGCAT TGGCTGATAA ATATGACCAA AAGGGTGTGA GTGTTGACGA GCGGCTGGTG GCAGTTGCTG TAACTCTTGA AAAGATAACA GAGAACTTCA TACAAAAGGA TAGCCTAGCA GCAGTAGAAA GCCCAGATGG TATGAAAATA TCTAACGCGA GCTTGACCGA AGAACTTGAT GTTCTCTCCC CAAAGCTAAG TGATTGGTCG CGAAGAGGGT CGGAGGACAT GCTTGACTGT TTTCCGGAGG CTGATAATTC AGTTTTCATG GATGATATGA GATGTTTACC TTCAATGTCA TGCAGAACTC GTTTTGGTCC CAAGTCTGAT CAAGGCATGA CTACTTCATC TGCCGGTAGC ATGACTCCTA GATCCCCTAT TCCAACCCCT AGACCCGATC CAGTTGAATT GTTATTAGGA GGCAAGGGTA CATTCCATGA CCAGGATGAT TTCTCTCAGA TGAGTGAACT TGCTGACATT GCAAGATGCG CAGCAAATCC CATTCCAGTT GATGATCAAT CTATTCAGCT TTTACTTTCT TGTCTTGAAG ACTTGAGAGT TGTCATTGAC CGCAGAAAGT TTGATGCACT TATAGTAGAA ACTTTTGGAA CACGCATAGA AAAGTTGATA CAGGAAAAGT ATCTTCAGCT GTGCGAGCTT ATGGATGATG AAAAAGGTAC CATGATTGAT GAAGATGCTC CTTTGGAAGA TGATGTTGTT CGCAGCTTGA GGACCAGTCC AGTACATCTG CGGGACCGCA TATCCATAGA TGATTTTGAG CTCAGGGAGA CAATTAGTAG GGGAGCTTTT GGGCATGTTA TCTTGGCTCG TAAGAACACT ACAGGAGACC TATTTGCAAT TAAGGTTCTG AGGAAGGCAG ATATGATCCG CAAGAATGCT GTGGAAAGTA TACTTGCTGA ACGAGATATT TTGATCAACG CCCGCAATCC CTTTGTGGTT CGATTCTTCT ATTCTTTTAC TTGTAGCGAA AACCTGTATC TTGTGATGGA ATACCTCAAT GGAGGGGATT TTTATTCAAT GTTGAGAAAA TTAGGTTGCT TGGATGAAAC TAATGCCCGT GTATACATTG CAGAAGTTGT CCTTGCTTTG GAATATTTAC ACTCTGAGGG TGTTGTGCAT CGTGATTTGA AGCCTGACAA TTTGTTGATT GCACATGATG GTCATGTTAA GTTGACAGAT TTTGGGCTTT CAAAAGTTGG TCTCATCAAC AGCACCGATG ATCTCTCTGG TCCAGTTTCC AGTGCAGTGT CGCTGCTTGT TGAGGAGAAA CCAAAATTGC CGACATTGGG GCATAAGCGG TCTGCAGTGG GCACTCCTGA CTACTTAGCG CCAGAAATTC TTTTGGGGAC AGGACATGGT GCAACTGCGG ATTGGTGGTC TGTTGGCATC ATTTTGTATG AATTCATTGT GGGGATTCCG CCCTTCAATG CTGACCATCC TCAGCAAATC TTTGACAATA TTCTCAACCG AAATATACAA TGGCCTCCTG TTCCTGAAGA TATGAGCCAT GAAGCCCGTG ATTTGATAGA TCGGTTATTA ACAGAAGATC CCCATCAGAG ACTTGGAGCT AGAGGGGCGG CTGAGGTCAA GCAGCACATC TTCTTTAAAG ACATAAACTG GAACACTCTA GCACAACAGA AGGCTGCATT TGTGCCGGAT TCAGAAAATG CTTTTGACAC AAGTTACTTC CAGAGTCGCT ACTCGTGGAA CTATTCGGAT GAGCAATGTT TTCCTCCCAA TGAGAATGAA GATTGTAGTG ACGGTGACAG CTTGAGTGGC AGTAGTGGTC GCTTAAGCAA TCATCACGAC GAGGGGGTTG ATATACCCCG TGGACCTGCG GAGTTCGAAA CTAGTGTCTC TGAAAATTAC CCATTCGATA ATTTCTCGTT CAAGGTATTG TATCATGACT TTCTTTCTAT GATCCCTTGT CACCCAAGTA TACGATTGAT CATTGTAGAA GTTCCCTTGC AAGTTTCATT TTTGGATTGA 
Length3780
Protein Sequence
Protein Residue
Map Locationscaffold_1: 23531135.. 23537342
Download Sequence
A.thaliana
AGI-codeAT1G48490.1
DescriptionProtein kinase superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg331828
5.74456 Ahg481564 DNAJ heat shock N-terminal domain-containing protein
13.4164 Ahg491819 protein kinase family protein / WD-40 repeat family protein
13.4164 Ahg331439
13.5647 Ahg490142 glucan synthase-like 1
18.303 Ahg475282 vacuolar protein sorting 34
18.9737 Ahg927592 RING domain ligase1
19.2354 Ahg903021 auxin transport protein (BIG)
19.3649 Ahg491088 NAC transcription factor-like 9
19.5959 Ahg489211
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression