| Annotation |
|---|
| Description | jgi|Araly1|491819|fgenesh2_kg.7__1252__AT4G29380.1 |
| Sequence |
ATGGGAAACA AAATCGCTCG TACGACACAA GTCTCGGCGA CGGAGTACTA TCTCCACGAC TTGCCGTCTT CTTACAATCT GGTCTTAAAA GAGGTTTTAG GTCGAGGAAG ATTCTTAAAG TCGATCCAAT GTAAGCACGA CGAAGGATTG GTCGTTGTTA AGGTTTACTT CAAGCGTGGT GACTCGATCG ATCTCAGAGA GCACGAGCGT CGTCTCGTGA AGATCAAGGA TGTGTTTTTG TCTCTTGAAC ATCCTCACGT TTGGCCTTTC CAGTTTTGGC AAGAGACTGA TAAAGCAGCA TATCTAGTGA GGCAATACTT TTACAGTAAT CTGCATGATC GGTTGAGTAC TCGGCCTTTC CTCAGTCTTG TAGAGAAGAA GTGGTTGGCG TTTCAGTTGC TTCTTGCTGT GAAGCAATGC CATGAGAAGG ATATATGTCA TGGTGATATC AAGTGCGAGA ACGTATTGCT GACTTCCTGG AACTGGCTGT ACCTTGCTGA TTTTGCATCC TTCAAACCCA CATACATTCC TTATGATGAT CCTTCAGACT TTTCCTTCTT CTTTGACACA AGGGGACAAA GACTTTGTTA TCTGGCTCCA GAGAGATTCT ATGAGCATGG AGGTGAGACA CAAGTAGCAC AAGATGCTCC ATTAAAGCCC TCCATGGATA TATTTGCTGT GGGGTGTGTG ATAGCAGAAC TTTTTCTTGA GGGTCAGCCA CTATTTGAAC TGGCGCAGCT TCTCGCTTAT CGTAGAGGGC AACATGATCC TAGCCAACAC CTTGAAAAGA TTCCTGATCC GGGAATTCGC AAGATGATTC TTCATATGAT TCAGTTAGAA CCCGAAGCAC GCCTATCTGC TGAAGACTAC CTGCAAAATT ATGTCGGAGT TGTTTTCCCA AACTACTTCT CACCATTTCT GCACACTTTA TATTGTTGTT GGAATCCACT TCCTTCAGAC ATGAGGGTAG CAACTTGCCA GGGGATATTT CAAGAAATTC TTAAAAAGAT GATGGAAAAT AAGCCAGGTG ATGAGATCGG CGTTGATCCT CCTGTAACTT CAGATCCAGT GAACGCAAGC ACGGTACAGG AAACATTTGC AAATCACAAA TTGAACTCAT CGAAGGACTT GATAAGGAAT ACTGTAAACT CTAAGGATGA GATCCTTTAC TCTATTTCTG ATGCACTCAA GAAAAATCGC CATCCTTTCT TGAAAAAGAT AACAATGGAC GATTTGGGTA CACTAATGTC TCTCTATGAT AGCCGTTCTG ACACTTATGG TACGCCTTTT CTACCGGTAG AGGGTAACAT GAGATGTGAG GGAATGGTTC TGATTGCATC TATGCTCTGT TCTTGTATCC GCAATATCAA GTTGCCTCAT TTGAGGAGGG AAGCTATACT TCTATTGAGA TCTTGCTCTT TGTATATTGA TGATGATGAT CGCTTACAGC GTGTACTTCC ATACGTCGTT GCCTTACTTT CTGATCCAAC AGCAATCGTG CGGTGCGCTG CCATGGAAAC TTTGTGTGAT ATTCTGCCGC TTGTCCGAGA TTTTCCTCCT AGTGATGCGA AGATTTTCCC AGAGTACATA TTTCCGATGC TCTCCATGCT TCCTGAAGAT ACGGAAGAGA GTGTGAGGAT ATGCTATGCC AGCAATATTG CAAAACTCGC TCTTACTGCT TATGGATTCT TGATACATTC TTTCCAGTTG AGCGATGTAG GGGTTCTTAA TGAATTGAAT TCCCAGCAGA TCTCACCTAC ACCTGCTAGT GAGACCCCTA GTCATTTGCA AAAGGCAAAT GGCAATGCGC AGCTTGCACA GCTTAGAAAA ACTATAGCTG AAGTTGTTCA AGAGCTTGTT ATGGGTCCAA AACAAACTCC AAATGTTAGA AGAGCACTCC TTCAGGACAT AGGGGAGCTC TGCTTTTTCT TTGGTCAGAG GCAGAGTAAT GACTTTCTAC TACCGATCCT CCCTGCCTTT CTAAACGACA GAGATGAACA GCTAAGATCT GTATTCTTTG AGAAGATTGT TTATGTATGC TTTTTTGTTG GTCAGAGAAG TGTGGAGGAG TATCTATTGC CTTATATCGA TCAAGCTTTG AGTGATCAGA CAGAGGCTGT CATTGTCAAT GCATTGGAGT GCTTATCCAC ATTATGCAAG AGTAGTTTCT TGCGGAAGAG AGCTCTCCTC CAAATGATAG AGTGTGTTTA TCCTTTGTTG TGCTATCCAT CTCAATGGGT AAGGAGGGCA GTTGTCACTT TCATTGCCGC AAGTAGTGAA TACTTAGGTG CAGTCGACTC TTATGCTTTT ATTGCCCCAG TAATACGCTC TTATCTTAGT AGACTGCCTG CGTCAATTGC TTCTGAGGAA GGTCTACTTT CATGTTTGAA GCCCCCAGTC ACAAGGGAGG TAGTTTACCG TATCTTTGAA AAAGCCAGGA ACCCAGAATT CATGGCGAAA CAGCGAAAGA TGTGGTATAG TTCTTCACCT CAATCCAAAG ATTGGGAAAC TGTTGATTTG TTTGACAAAG ATGCTGGGGA GTTGAATTCA ATAGAATGCA GGGCCGAACA GAAGCAAAGT GTGGAAGGAC AGAAACAGAT TAAGAGTGCA TCGAAGCAAC AAGAAGTTCA AGGAAAGTAT GCAGAAAAGG ATGCTAAATT AAGAATCCCG AGAAACCCAA GACCTAATGC TTCTAACACT GTTGAGCTAC GTGATCCCGT GTATCCAGAG AAGTTACAGT TCTCTGGGTT TATGGCACCA TATGTATCTG GTATGAATAG CTTTATTGAA CCAGAGAACA TACCTCTCTA TTCGTTTAGC ATGGACAAAC GAGCAGCTAC AAATCCTCCT GTGGCTTCTG AGTCTTCATT GCAGATGAAC TCTCTGGGAA TGGGTTCATT GTCTGTGCCA TGGATGGATT CCATGAGTAA ATCATTTAAC TTGGCTAGTT CGGTCCCTGT GCCTAAGCTG ATTTCTGGGT CATTCCATGT CGGTACCAAT CCTAAACAAT TTTACAGAGT GGTACATGAG CCAGAAAGCA GAGAAAATGA CCAAATCTCC TCAGCTATCA GTAAATTTCA AGACCTCGGA GTATCAAGCT CCTCAAAAAG TGCTTCTGTA ACTTCAGAAG ATGCTTCTTC TCCAGCGGAT CTTGTAGGAG AACCATCTCT GTCAAGGACA TCGGTTCCGG ATTCAGGGTG GAAGCCTCGT GGAGTATTAG TTGCTCATCT ACAGGAGCAT CGCTCTGCGG TCAACGACAT CGCCACTTCA AGCGACCATA GCTTTTTTGT TAGTGCATCA GATGATTCCA CAGTGAAGGT GTGGGACTCT AGAAAACTGG AAAAGGACAT CTCTTTTAGG TCAAGGCTAA CATATCATCT CGAGGGAAGC AGAGGGATGT GCACAACAAT GCTTCGGAAT TCAACACAAG TTGTAGTTGG AGCCTCTGAT GGTGTGATAC ATATGTTTTC AATCGACCAT ATCTCCAGAG GCTTGGGGAA CGTAGTGGAG AAGTATTCAG GCATTGTTGA TATTAAAAAG AAGGATGTTA AAGAAGGCGC TCTAGTTTCT CTCTTGAATT ATACCGCTGA TAGCCTTTCT GGTCCGATGG TAATGTATAG TACCCAAAAC TGCGGAATCC ACCTTTGGGA TACAAGATCA GATTTAGATG CATGGACACT GAAAGCAAAC CCCGAAGAAG GATATGTGTC TTCATTGGTT ACAAGCCCTT GCGGGAATTG GTTTGTCTCT GGGTCTTCAA GGGGATTGCT TACTCTTTGG GATTTGAGAT TTCGTGTTCC TGTAAATTCG TGGCGATACC CTATCATATG CCCCATAGAG AAGATGTGCC TCTGCTTTCT TCCTCCAAGC GTCTCAGTGT CCACCACTAT GAAACCTTTT ATTTATGTTG CTGCAGGTTG CAACGAAGTT TCACTCTGGA ATGCAGAGGG AGGTAGCTGT CACCAGGTAT TGAGAGTAGC CAACTATGAA AATGAGACGG ATGTTTCCGA GTTTCAATGG AAGTTACCAA GCAATAAGGT AAATCCCAAG CCGAATCTTC GCCAGAACAT GAGCTCCAAG TACAGAATCG AAGAGTTGAA CGAGCCTCCT CCTCGTCTTC CTGGTATCCG CTCTTTGCTT CCTTTACCTG GAGGTGACTT GTTAACAGGT GGTACTGACT TGAAGATTCG GCGTTGGGAT TACTCCAGCC CTGAGAGAAG TTATTGTATA TGCGGTCCGA GTTTGAAAGG AGTCGGAAAT GATGATTTTT ATGAAGTAAA AACCAACTCC GGCGTGCAAT TTGTTCAGGA GACAAAGAGA CGGCCTCTGG CAACCAAACT GACAGCAAAG GCAGTACTTG CGGCTGCTGC CACAGACACA GCAGGTTGTC ACCGTGACTC AGTTCAGTCT CTGGCATCTG TGAAACTGAA CCAGAGACTG TTGATATCAA GCAGCAGAGA TGGAGCCATT AAGATCTGGA AGTAAGTGTA CAGTGTTATA GTGTTTATTT TTTAGTTTAC CTTTTCATTG TAACATCAAA TGCTAAAAGA AATTTTTTAG CCTTGTATCC TTTTACTCGA TAAACTTTCT TGTGCAGATT TCTCCTTTGT A |
| Length | 4611 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 4953780.. 4959828 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G29380.1 |
| Description | protein kinase family protein / WD-40 repeat family protein |
| TAIR curator summary | |
| Alias | [AtVPS15][VPS15][Arabidopsis thaliana vacuolar protein sorting 15][vacuolar protein sorting 15] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg488829 | Telomerase activating protein Est1 |
| 4.47214 |
Ahg490295 | bZIP transcription factor family protein |
| 4.69042 |
Ahg921142 | NAD kinase 2 |
| 5.19615 |
Ahg492879 | K+ uptake permease 9 |
| 5.65685 |
Ahg477381 | SIN3-like 1 |
| 6 |
Ahg490770 | peroxisomal ABC transporter 1 |
| 6.48074 |
Ahg935788 | sister-chromatid cohesion protein 3 |
| 6.7082 |
Ahg491066 | ACT-like protein tyrosine kinase family protein |
| 6.78233 |
Ahg491768 | autoinhibited Ca(2+)-ATPase 10 |
| 6.9282 |
Ahg495534 | Uncharacterised conserved protein (UCP012943) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|