| Annotation |
|---|
| Description | jgi|Araly1|475282|fgenesh2_kg.2__412__AT1G60490.1 |
| Sequence |
ACACATATTT TACGAATTCG AATTTCAAGT TTCCGATTCT CTAAATCAAA AGCCCTAATT TTGATCCTCT AAGTCACACA TGGGTGCGAA CGAGTTTCGT TTCTTCCTCT CCTGCGATAT CAATTCGCCC GTCACTTTTC GTATAGAGAA GCTTGATGGA AACCTCCCCG TCAAGAAATC TTCTGATTCC GGAGTTGTCT CCGTCGCAGA GGAGAAAAAA CCAGAGCTTT ACATTGAATG TGCATTGTAT ATTGATGGAG CTCCTTTTGG CCTTCCCATG AGAACAAGAT TAAAAACTAC AGGACCACCA TACTGCTGGA ACGAACTCAT CACTCTCAGT TCTAAATATC GGGACTTGAC TGCCCATTCA CAACTTGCGA TTACAGTATG GGATGTTTCG TGTGGTAAAA CTGAGGGACT GATTGGTGGG GCAACAGTCC TTCTATTTAA CAGCAAGATG CAAATGAAAT CAGGAAAGCA GAAGCTCAGG CTCTGGCAGG GGAAAGAAGC GGATGGTTCA TTTCCAACCT CTACTCCTGG AAAGGTTCCA CGGCATGAGC GCGGAGAGCT AGAGCGTTTA GAGAAGCTCA TGAATAAGTA TGAGAGGGGG CAGATCCAAA GCATTGATTG GCTGGATCGA CTTATGTTGA AATCCTTGGA TACTATCAAG GATCAAGAAA GCTCCAAACA TGGAAGCTCA CATCTGTTCG TGGTTATTGA TTTCTGTAGT TTTGAACATC GAGTTGTATT TCAGGAGTCT GGAGCCAATT TGTTCATAAC TGCCCCAATA GGTTCAACAA ATGAATTTGT TACCGTCTGG GATACAGAAC TGGGAAAGAC TAATCCTTCA GAGAACAAAC AACTAAAGCT GGCAAGGAGC TTGGATCGCG GCATTATCGA CAGGGATCTA AAGCCAAGTA ATATCGAGCG GAAGTCCATA CAAAGAGTTT TGAAATATCC GCCAACAAGG ACATTGAGTG GAGATGAAAG ACAACTTCTT TGGAAGTTTC GTTTCTCTCT AATGTCTGAA AAGAGAGCTC TAACAAAGTT TCTTCGCTGT GTGGAGTGGA GTGATGTTCA GGAAGCAAAG CAAGCAATTC AACTGATGTA CAAATGGGAA ATGATAGATG TATGTGATGC TTTGGAGCTA TTGTCTCCTC TATTTGAGAG TGAAGAGGTT CGAGCTTATG CTGTGAGTGT CCTGGAAAGA GCTGACGATG AAGAGCTTCA ATGTTACTTG CTTCAACTGG TTCAGGCTCT CCGTTTTGAA CGCTCCGATA GATCTTGTCT TTCTCAATTC CTTGTACAGC GGGCATTACA GAATATTGAG TTGGCCAGTT TTCTTCGTTG GTATGTTGCT GTGGAACTTC ATGACCATGT CTATGCCAAG CGATTTTACA GCACATATGA GTTACTTGAG GAGAATATAA TCAAGCTGCC ACCTGGTGTT AACGGCGAAG ATGGATATCA ATTGTGGCAG AGTTTGGTGC GCCAAACAGA ATTGACTGCT CAGTTATGTT CCATTACACG AGAAGTGAGG AATGTACGTG GAAACACCCA GAAAAAAATT GAGAAGCTCA GGCAGCTATT AGGTGGACTC CTTAGCGAAC TTACCTACTT TGAAGAGCCT ATTCGATCAC CGCTTACCCC TAATGTTCTC ATAAAGGGGA TTGTGGCAGG AGAATCAACA CTCTTTAAAA GTGCATTGCA TCCTCTGCGC CTTACATTCC GAACACCAGA AGAAGGAAGT TGCAAATTAA TATTTAAGAA GGGAGATGAT CTCCGGCAGG ACCAACTGGT TGTTCAAATG GTTTGGCTCA TGGATAGATT ACTTAAGCTG GAAAATCTTG ATCTGTGCCT AACGCCTTAT AAGGTGTTAG CAACTGGACA TGATGAAGGA ATGTTGGAAT TCATACCATC CCGTTCTTTG GCTCAGATTC TCTCAGAGCA CCGAAGCATA ACAAGTTATC TGCAGAAGTT TCATCCTGAT GAGCATGCGC CTTTCGGGAT AACAGCCACT TGTCTGGATA CATTTATAAA AAGCTGTGCA GGCTATTCTG TGATCACATA TATACTTGGG ATTGGAGACA GACACCTGGA CAACCTCCTC CTTACAGATG ATGGTCGTCT TTTCCACGTT GATTTCGCTT TTATTCTCGG TAGAGATCCT AAACCATTCC CTCCACCTAT GAAACTCTGC AAAGAAATGG TGGAAGCCAT GGGCGGAGCA GAAAGCCAAT ACTACACAAG GTTCAAATCC TACTGTTGTG AAGCCTACAA CATTCTCCGG AAATCGAGCA ACCTTATTTT GAATCTGTTT CATCTCATGG CGGGTTCAAC TATTCCCGAT ATAGCTTCAG ACCCGGAAAA GGGCATTCTC AAACTCCAGG AAAAGTTTAG GCTTGACATG GATGACGAAG CATGCATCCA TTTCTTTCAA GACCTGATTA ATGAAAGCGT AAGTGCGCTG TTCCCGCAAA TGGTTGAAAC CATACACAGA TGGGCTCAAT ACTGGCGTTG AACCC |
| Length | 2525 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 2897017.. 2901686 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G60490.1 |
| Description | vacuolar protein sorting 34 |
| TAIR curator summary | Encodes a phosphatidylinositol 3-kinase that is expressed in most plant tissues. Defects in VPS34 affect a number of cellular processes. Loss of function mutations are not transmitted through the male gametophyte due to defects in microgametogenesis therefore it is difficult to assess the effects of loss of VPS34 function in the whole plant. Involved in salt-stress responses. |
| Alias | [ATVPS34][PI3K][VPS34][PHOSPATIDYLINOSITOL 3-KINASE][vacuolar protein sorting 34] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.82843 |
Ahg479273 | tetraticopeptide domain-containing thioredoxin |
| 4.89898 |
Ahg486817 | MIRO-related GTP-ase 2 |
| 7.14143 |
Ahg491024 | phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases |
| 7.14143 |
Ahg942216 | chloride channel D |
| 7.48331 |
Ahg489168 | Zinc finger, C3HC4 type (RING finger) family protein |
| 13.4164 |
Ahg496120 | Ras-related small GTP-binding family protein |
| 17.72 |
Ahg323999 | Structural maintenance of chromosomes (SMC) family protein |
| 18.303 |
Ahg336969 | Protein kinase superfamily protein |
| 18.735 |
Ahg491257 | D111/G-patch domain-containing protein |
| 19.2873 |
Ahg489377 | Ubiquitin-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|