Detail



ID : Ahg338779

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|338779|fgenesh1_pg.C_scaffold_2000878
Sequence
ATGGCATCAA ACGGATTCTT CTCTGCTCAA AGAAACGCAC ACCGTAACGC AAACGCTGGA ACAACGTTGA AGAGACGAAT CGACAACAAT CGCGGTTACG GAATCGGAGA TTTACAAGAG GAAAGGAACC GTTACGTGCC GCCGCAAAAA CGTTTCAGAT CGCAAACGCA ACCGCAAACG AATTTCCGAT CTGGTCATAT TCCTCTGTAT CATCATCATG GTAGAAATAA TAATAACATG TCTAGGGTTT CTTCTCAATC ATATAACAAT TACGGTGTTG ATGTGATTGC TTCTAATTCA AGTTTTCCAT TACGTAACAA TGATTCTAAC ATCAACAATT ATCAGAAACC CTTTATTGTT GGTTATGGAA ACCCTAATCC CCAAATTGTT CCTCTTCCAT TACCTTATCG TAAGCTTGAT GATGATGATT CGTTGCCTGA ATGGGTTCCG AATTCAAGAA CCCTAACTCC GAATTTTGTA CCAAACACTT ATGTTCAAAA TCCGATGAAT CATTCGAACA TGGTTTCAGT TGTGTCACAA ACGATGTCTC ATCATCAACC AATTGTTTTG AGCAAAGAAT TGTCTGATTT ACTTAGCGTT CTTAGGAATG AGAAAGAGAA GGAAACTTCA GAAGCAAGTA AAAGTGATTC ATTGCCCGTT GGATTAAGCT TTGATAATCC ATCGTCGTTG AATGTGCGAC ATGAATCTGT GATTAAGTCT CTGTATTCGG ATATGCCGAG GCAATGTTCG TCGTGCGGGG TTAGGTTTAA ATGTCAAGAG GAACATAGCA AGCATATGGA TTGGCATGTA AGGAAGAACA GGATGGCTAA AACCACTATG AGATTGGGCC AGCAACCGCA GAAATCGCGG GGATGGTTGG TAAGCGCATC TTTGTGGCTT AGTGCAGCAA CTGGAGGAGG GACTGTAGAA GCGGCTAAAC CATCTTTCGG AGGAGAAACG CAGAAGAAGA AGGAAGAGGA GAAAGAACAA CAACAGATAG TGCCTGCAGA TGAAAATCAG AAGAATTGCG CGTTGTGCGA AGAGCCGTTT GAAGAGTTCT TTAGCCATGA AGCTGATGAT TGGATGTATA AAGATGCAGT CTACTTAACC AAGAACGGTC GTATAGTTCA CGCTAAGTGT ATGCCTGCAC CCCGACCTGC AAAGGATACG AGAGAGCCGT CTAGGGTAAT GTCTGTTACA GTTCCATCGG TTGCGAAAGC AATATGTCTC GATGAAACCG AGGAGGATAT TCATGAAAAT CTCAGCCGCT CGGCTTCATC CGTCGAATTG AATGGAGATT GCGTTTTTAA TCCGTCTTTA TCATCATCTG CTGGAGAAAA TGATCGTAAA TTAGGGTTTA GGGTTGTGTC AGAAATTAGG CGTTTCACAA TTGGGAATTA A 
Length1401
Protein Sequence
Protein Residue
Map Locationscaffold_2: 9503713.. 9505915
Download Sequence
A.thaliana
AGI-codeAT5G43620.1
DescriptionPre-mRNA cleavage complex II
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.16228 Ahg949754 Integrase-type DNA-binding superfamily protein
7.34847 Ahg495276 MATE efflux family protein
8.60233 Ahg944463 redox responsive transcription factor 1
10.247 Ahg494421 Protein of unknown function, DUF584
12.9615 Ahg908088 Disease resistance protein (TIR-NBS class)
12.9615 Ahg485210 cytochrome P450, family 94, subfamily B, polypeptide 3
14.8324 Ahg949051 calmodulin like 37
15.4919 Ahg471409 Integrase-type DNA-binding superfamily protein
19.0526 Ahg472144 Integrase-type DNA-binding superfamily protein
22.2935 Ahg328051 PLC-like phosphodiesterases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression