Detail



ID : Ahg339164

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|339164|fgenesh1_pg.C_scaffold_2001263
Sequence
ATGTTCAGAA AAACTCTAAC TATAATCTCA CGAAGACATT TCTCTTCGTC TTCTCCTGAA AGTCCTTCCC TTTACTCATT CCTTAAACCC TCTCTCTTCT CTAACAAGCC AATCACTCTC ACACCTTCAC TATCACCGCC TCAAAACCCC AAAACCCTAA CCCAAGAGCA AAAATCCTCC TTTGAATCTA CCCTCCACGA TTCTTTAACT ACCCACAACA CCGATGAAGC ATGGAAGGCT TTTCGATCTC TCACCGCCGC CTCTTCTCTC CCGGAGAAGC GTCTCATCAA TTCTCTTATT ACCCATTTGT CCAATACCGA AGAAAGCGGT GAAAACACTG CACACAGACT CAAGCGAGCT TTTGCTTCCG CTGCTTATGT AATAGAGAAA GATCCGATTT TGCTTGAGTT TGAGACTGTT CGTACGCTTA TGGAGTCGAT GAAACTTGCG AAAGCTGCAG GGCCAGCGTT GGCTTTAGTG AAGTGTATGT TTAAAAACAG GTACTTTGTT CCTTTTGATC TCTGGGGGCA TTTGATTATC GATATCTGTA GAGAAAATGG AAGCTTGGCT GCGTTTCTTA AGGTGTTTAA GGAAAGTTGT AGAATTGCAG TAGATGAGAA GCTTGATTTT ATGAAACCGG ATTTGGTAGC TAGTAATGCG GCTCTTGAAG CGTGTTGTCG GCAGTTGGAA TCTTTGGCTG ATGCTGAAAA TGTGATTGAA TCTATGGCTG TTTTGGGTGT GAAGCCTGAT GAATTGAGCT TTGGGTTTCT TGCTTATTTG TATGCGAGTA AGGGGCTTCG AGAGAAGATA AGTGAGCTTG AGAATTTGAT GGATGGTTTT GGGTTTGCAA GTAGAAGAAT ACTTTATTCC AATATGATTA GTGGGTATGT TAAAAGTAGT GATTTAGATA GTGTTTCTGA TGTTATACTG CATAGTCTTA AAGAAGATGG GAAAGAATCG GGTTTCGGTG AGGAAACGTA CTGTGAATTG GTTAAAGGGT TTATAGAGAG TAAAAGCGTT AAGAGTTTAG CGAAAGTGAT AATCGAAGCT CAGAAGTTGG AATCTTCTTC CATTGATGCT GACAGTTCAG TTGGGTTTGG AATCATTAAT GCTTGTGTTA ATCTTGGATT CTCGGATAAA GCACATAGTA TTCTTGAGGA AATGATTGCT CAAGGAGGAG GATCTGTGGG GATTGGGGCT TATGTGCCAA TCTTGAAAGC TTATTGCAAA GAGTACAGAA CAGCTGAAGC TACTCAGCTG GTTACAGAGA TCAACAGCTC TGGGCTTCAA TTAGATGTCG AGATCTATAA CGCTTTGATC GAAGCTTCCA TGACGAACCA GGATTTCATA TCTGCGTTTA CATTATTTAG GGATATGAGA GAAACAAGAG TGGGGGATTT GAAAGGGAGC TACTTAACAA TAATGACAGG TCTCCTTGAG AACCAGAGAC CTGAGTTAAT GGCAGCGTTT CTAGACGAAG TTGTCGAAGA CCCACGTGTC GAAGTAAATT CCCATGATTG GAATTCGATT ATTCATGCGT TCTGTAAATC TGGGCGTCTG GAAGATGCAA GGAGGACATT CAGAAGGATG GTTTTCCTCA GGTATGAGCC GAACAACCAG ACATACTTAT CCTTGATTAA TGGATATGTG AGCGGCGAAA AGTACTTCAA CGTCCTGCTC TTGTGGAACG AGATTAAAGG TAAGATATCG TCGATGGAGG CAGAGAAGAG GTCCAAACTA GACCATGCTC TAGTCGATGC GTTCTTGTAC GCATTGGTGA AAGGAGGGTT CTTTGATGCA GCGATGCAAG TGGTAGAGAA ATCTCAGGAG ATGAAGATAT TTGTGGATAA GTGGAGGTAT AAGCAAGCAT TCATGGAGAC TCACAAGAAA CTTAGATTGC CAAAGCTGAG GAAGAGGAAC TACAAGAAAA TGGAATCTCT TGTTGCCTTC AAGAACTGGG CTGTTTGCAA AATTGTATTA AGTTTCAATT TGGTTTATAG ACAGAGAAGA ATCGTGAAGA GAAGATTACT TACGGAGGGA GCCATTGCGG CTATGGAAAC GAATCACAAG AAAGGAAAAA CTAGAAAGGC TTATCATCTA AAGAAGCATA GAAAATCAGA TAATAATAAG AGTTTCGATC CAAGACCAAC GATCAAAGAA GTGAATGATG AGAAGCCGGT TTTGTTCCAA TTGGGGAGCA TTGCTAGTTA TGGGGTCAGT GATGTTCGTC TCGAGGCAGA TCCAGAGATC ACCACTAGAA GATCCACATC TCTTTCCTTG TCTTCATTGT CTCCAACCTC TTCAGGGGAT ATACTCGAGA TCAATGCAAA AGAAAGGAAA TCCAGCTTAT CTTTCGATAG TAGCGTACAC AATAAGGAGC TCTTAAGCCT TTCTTCTAAA TTATGCGAGT TACAAGGTTC ATCAGACACA CCAGGGTCAC AAGTGTCTGG TGTAACTCAT GCTTCAGTGG AGCCTTTGCT TATGTCGCCT TCTGTTCAAA TGATGGATAG AGAAGGATCT GATCAACCTC AGAGAAACTC GTTACCGACC TTGGAGAAGA ATTTGAGCAC ACTTTCAAAT GATTCTCTGT TTAGTCTCAG CATAGGTGAT AACGCGATAG CAAGAGATGA GTTGTTTAGT TACCGTGATT TCAAGTCTGG AGAGATCACA AAATCGGGAG AGCTGTTATC GTTCTGCCCT GCTACTCATG GTCCGGCTGA TTCTTCTGAT CTAGGAAAGA GCTTTGATAT GGAGGACAAA GCGAGTGGAG AATGTGAGGA TAAGTCATCG AACTCAAATG TATCGTGGAG GAACATTGGA GATTGCAATA ACTCAGACGA AGCTCCGAGC AGCACGCAGT CATTTTCATA TCCAATAACG AAAAAGAAGA AGAAAAAAAA GAAGGCAATA AAGAAGAAGA TGACACAGCA GCAGCAACAG AAGAAGAGAT GTTCTTGGTT GTGTTGCAAG AACACTGGAC CGTGCTTCTC CTGCTGCAGA TGGCCAAATG GCCAAGTTGT GATTACAATT CTTCTTGTGG CTGGCTCTTC TGCTGCCATT GGAGCTGTTG GAGTTGCTGT TCCAGGTAGA TTGCTACTTC CAGATTCTCA TGACATTGGT CTTCTTTAA 
Length3129
Protein Sequence
Protein Residue
Map Locationscaffold_2: 12867635.. 12871710
Download Sequence
A.thaliana
AGI-codeAT1G69290.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4 Ahg483334 vascular plant one zinc finger protein 2
9.48683 Ahg486635 Pentatricopeptide repeat (PPR) superfamily protein
14 Ahg329122 zinc finger WD40 repeat protein 1
14.6969 Ahg477087 ARM repeat superfamily protein
25.1992 Ahg943541 SET domain-containing protein
29.6985 Ahg490295 bZIP transcription factor family protein
32.249 Ahg897626
34.1906 Ahg470814 Histone superfamily protein
39.2428 Ahg353533
39.4208 Ahg496922
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression