Detail



ID : Ahg329122

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|329122|fgenesh1_pm.C_scaffold_7001349
Sequence
ATGGATTTAG ATATGAACGG AGGAAACAAG AGAGTCTTTC AAAGACTAAG CGGTGGCTCG AATCGGCCGA CGACGGACTC GAATCAGAAG GTTTGTTTCC ACTGGCGAGC TGGCCGGTGC AATCGTTACC CTTGCCCTTA CCTGCATAGA GAATTGCCGG GTCCGGCTCC GGGTCCTTCG TCTACGAATA AAAGGGTCGC TGATGAATCT GGTTTTGCGG GCCCGAGTCA CCGGAGAGGG CCAGGATTCA GCGGGACTGC TAATAACTGG GGAAGATTCG GTGGGAACAG AACGGTGACG AAGACGGAGA AACTTTGCAA ATTCTGGGTT GATGGAAATT GCCCTTACGG TGATAAATGT AGATACTTGC ATTGTTGGAG CAACGGAGAT AGTTTCTCCT TGTTGACGCA GCTAGACGGA CATCAGAAGG TTGTCACTGG GATTGCTCTG CCATCAGGAT CAGATAAGCT TTACACTGCG AGTAAAGATG AAACTGTGCG GATATGGGAT TGTGCTTCTG GACAGTGTAC AGGTGTACTC AATCTTGGTG GGGAAGTTGG CTGCATGATT AGTGAAGGCC CCTGGCTATT GGTTGGCATG CCAAATCTTG TTAAGGCGTG GAATATCCAA AACAATGTAG ACCTGAGTCT CACTGGACCT GTTGGCCAAG TATATTCATT GGTTGTGGGC ACTGATCTAC TGTTCGCTGG CACACAAGAT GGGTCTATTT TGGTTTGGAA ATACAATAGC ACCACTAGCT GTTTTGATCC AGCTGCATCA TTAATGGGCC ACACCCTTGC AGTTGTTTCT TTATATGTTG GGGCAAACAG ACTCTATTCT GGTGCCATGG ACAATTCTAT AAAAGTTTGG TGCCTGGATA ATCTGCAGTG TATACAAACC CTTACAGAGC ATACTTCAGT TGTCATGTCT CTCATTTGCT GGGATCAGTT TCTTCTGTCA TGTTCTTTGG ACAATACCGT CAAGATATGG GCTGCTACTG AAGGTGGAAA CTTAGAAGTC ACATATACTC ACAAAGAAGA ATACGGCGTG CTAGCTCTCT GTGGTGTCCA TGATGCAGAA GCCAAGCCAG TATTGCTATG TTCGTGCAAT GACAATTCAT TGCACCTTTA TGATTTGCCA TCCATGTCAG ATGAACAAGA GGCTCCTCTG ATTAATGGAG TAGAACACAA GATTTGTGAG GTACTTCCGT TTGTAGATGA TGACTACGGA GGAGTGATCG TGGAGATGAA AACTCCTATG GATACTAAGT CTTTTGTTGC AGCGCTTAGA TATTCATTCG AGCACTGGCG GTCACAGGGT AAAAAGGGAG TCTGGTTAAA CTTGCCTCTC TCACACGTAA ACCTCGTGGA ACCTGCGGTT AAGGAAGGTT TCCGGTATCA CCACGCTGAG CCAACTTACC TGATGCTAGT TTATTGGATT CCGAAAGCCG AGAGTACTAT TCCTTTGAAT GCTTCCCATC GTGTTCGTGT TGGTGCTGTT GTCTTGAACC ATAACAAAGA GGAAAAATAC GGTAAATTAC GCGGATCAGG CAACTGGAAG ATCCCAACAG GAGTTGTTGA CGAGGGTGAG GAGATTTTCG CGGCAGCCAT TAGAGAAGTA AAAGAAGAAA CAGGCGTAAG AAGATCCATA TATCTTTATA TCGAGACTGA GTTTTTGGAG ATTCTAGCTT TCTGTCAAAC CCACGAGTCA TTTTTTGCCA AGTCAGATTT ATTCTTCGTT TGTCTCTTGA GACCTACCTC CTTTGATATT CAAAAACAGG ACTTAGAAAT CGAAGCAGCT CAATGGATGC GGTTCGAGGA CTCTGCCTCT CAACCTATCA CACACAAGAA CGAACTCTTA AAAGCTATTC ACCGCATTTG CTCAATGAAA ATGGAGAATA GCTATAGTGG TTTTTCCTCA CAACATATTA CAACTTTCTT TGACGACAAG TTAGGTTATC TCTACTTGAA TAAACAAGAA GATATGAAAA AACATATCTC TTAA 
Length2004
Protein Sequence
Protein Residue
Map Locationscaffold_7: 6632855.. 6638332
Download Sequence
A.thaliana
AGI-codeAT4G25440.1
Descriptionzinc finger WD40 repeat protein 1
TAIR curator summary
Alias[ZFWD1][zinc finger WD40 repeat protein 1]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg484485 actin related protein 2
6 Ahg493618 O-fucosyltransferase family protein
6 Ahg483834 CDPK-related kinase 3
6.7082 Ahg336766 Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein
13.2665 Ahg480657 AMP-dependent synthetase and ligase family protein
14 Ahg339164 Pentatricopeptide repeat (PPR) superfamily protein
15.2971 Ahg477986 importin alpha isoform 1
16.7332 Ahg495641 RNA-binding (RRM/RBD/RNP motifs) family protein
20.2237 Ahg481908 alternative NAD(P)H dehydrogenase 2
22.0907 Ahg481564 DNAJ heat shock N-terminal domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression