| Annotation |
|---|
| Description | jgi|Araly1|339169|fgenesh1_pg.C_scaffold_2001268 |
| Sequence |
ATGTATCAAG CCATTCCCAC GGCGGCAACC ATTCGTGGTG GAACTCCAAC AGAGAGTGGT GATTACGTTG TTACTTTGGA TCAGATTCCA CGGTGGAGTG ATGTTGAGCA GAGGTCATCT TTGGAGGGTG AAACAGGAGA TCCTGCACAT TCGAATCCAC GGTATGCAAA CCCTTTGGCT TCGTCTTCTG AAGCAGGGAG CAGCGGGAAT GGGATGGTAT CTAAGTTTCC TGTTGACCAC GAGATAAACT CTAGAATATA CCTGTGGAGA GGGGAACCTT GGAACCTTGA GGTTGATGCT GTTGTGAATT CGACAAATGA GAACTTGGAT GAGGCACATA GCAGTCCTGG TCTACATGTG GCTGCTGGAC CTGGCCTTGC AGAGCAATGT GCTACATTGG GTGGATGCAG GACAGGGATG GCAAAAGTAA CAAATGCCTA TGATCTACCA GCGAGGCGGG TTATCCACAC AGTAGGACCC AAGTATGCAG TAAAGTATCA TACAGCTGCT GAGAATGCTC TAAGTCACTG CTATAGATCT TGTCTGGAGC TTCTCATAGA CAGTGGCCTT CAAAGTATCG CTATGGGCTG TATATACACA GAAGCCAAAA ACTATCCCCG AGAACCAGCT GCTCATGTTG CCATAAGAAC TGTTCGCCGC TTTCTAGAAA AGCAAAAGGA TAAAATCAGT GCCGTTGTTT TCTGTACCAC CACATCCTCT GATACAGAGA TATACAAACG ATTACTTCCA CTTTACTTTC CTCGAGATGA ACATGAGGAA GAGGTTGCCA TCTCAAAGCT TCCAGCTGAT GTTGGAGATG AAAATGGTGA GACGGTTATA GACGAACGTA AAATCAGAAT ACAGGCGCTG CCAAATAAAC CTTCACCCAG ATCTTTTCCA ACTCCACTCG AGCGCCCTTC TACTGATCTT ACTTTGTTAC GCAGGAACTC GAATCATCTT GATTCGTATC TGGATCCTGC CTTCATGTCC TTGATTAAGG ATCCAGATGA AAGGCGCAAA GAACAATGGG AGAAGACTGC ACAAGCACAA AGTGGATTCA ATTTTGTTAA ATTGCTAGGA TTTGGTGATC TAGGAGGACC CCCTCTCTCT GCTGCAGAGG AATACTCACT TCATTCGCGA TACCTAGCGA AAGCTAATTC TCTCAACCTT TCCGAGATTG CAGAGATGAA AATTGTCTAC CGTGGTGGTG TTGACACCGA GGGTCATCCT GTAATGGTTG TTGTAGGAGC TCACTTTTTG CTGCGTTGTC TTGATCTGGA GCGTTTTGTG CTTTATGTTA TAAAGGAATT TGAACCTGTG ATACAAAAGC CTTACTCGAT TGTCTATTTT CATTCTGCAG CATCTTTACA AGTCCAACCA GATTTGGGAT GGATGAAAAG ATTACAACAG ATACTTGGTC GAAAACACCA GCGTAACCTT CAGGCAATCT ATGTTCTTCA TCCAACTTTT CACTTGAAGG CTACAATTTT AACTATGCAA TTCTTCGTGG ATAATGTGGT TTGGAAGAAA GTTGTATATG CAGACCGACT TCTGCAGCTG TTCAAATATG TTCCTCGTGA GCAGCTGACA ATCCCAGACT TTGTTTTCCA GCATGATCTT GAAGTTAACG GAGGAAAAGG TCTAATCGTT GATCCAAGAA CAAAATACCT GAAGATGACG CAGTACATGC CATTGTTTAG ATCATGTTCG AGCTTACGAT TAGTAAGTCA GCTTCATGCT CACCTCCTCG TCACCGGCCG TCTCCGTCGT GATCCTCTTC CTGTGACGAA GCTCATTGAA TCATACGCTT TCATGGGTTC TCCAGATTCG TCTAGGCTCG TCTTTGAAGC TTTTCCTTAC CCTGATTCCT TCATGTACGG TGTTCTCATC AAATGCAACG TCTGGTGTCA TTTACTCGAC GCTGCCATTG ATCTGTACCA TAGGTTGGTT TCGGAGAAGA CCCAGATCAG TAAGTTTGTG TTTCCGTCTG TTTTAAGGGC TTGTGCGGGT TCGAGGGAGC ATCTGAGTGT TGGTAGGAAA GTCCATGGGA GGATTATTAA GAGCGGTGTA GACGACGACG CTGTGATAGA GACGTCTCTG TTGTGTATGT ATGGTCAAAC GGGGAATTTA AGTGATGCAG AGAAGGTGTT CGATGGAATG CCTGTGAGAG ATCTTGTGGC TTGGAGTACT CTTGTTTCTA GCTGTCTCGA GAATGGTGAG GTGTTGAAAG CATTGCGGAT GTTTAAGTGT ATGGTGGATG ATGGTGTTGA GCCCGATGCT GTGACGATGA TCAGCATTGT AGAAGGATGT GCTGAGCTTG GATGTTTGAG GATTGCTAGG TCAGTCCATG GACAGATAAC GAGGAAAATG TTTGATTTTG ATGAAACACT GTGTAATTCT TTGCTTACAA TGTACAGTAA GTGTGGGGAT TTGCTTAGCT CGGAGAAAAT CTTTGAGAAG ATCGCCAAGA AGAACGCTGT TTCGTGGACA GCTATGATTT CTAGTTACAA TCGTGGCGAG TTCTCTGAAA AGGCATTGAG AAGTTTCAGT GAGATGTTAA AATCTGGAAT TGAGCCGAAT TTGGTTACGC TTTATAGCAT TTTGAGCTCT TGTGGATTGA ACGGGTTGAT TAGAGAAGGC AAGTCGGTCC ATGGTTTTGC AATTAGACGA GAGCTGGATC CGAACTACGA GTCGCTTTCT CCGGCCTTAG TTGAGCTGTA CGCTGAATGC GGGAGACTCA GTGACTGTGA GACAATTCTA CATGTGGTTG GTGATAGAAA TATTGTGTTA TGGAACTCTC ATATATCTCT ATATGCACAC AGAGGTATGG TGATTGAGGC ATTGTACTTG TTTAGACAGA TGGTGACATG GCGAATAAAA CCGGACTCAT TCACTTTGGC AAGCATAATC TCTGCATGCG AGAATACTGG TTTAGTCCGG CTAGGGAAAC AGATTCACGG ACATGTTATA AGGACGGATG TTTCGGATGA GTTTGTGCAA AACTCGGTGA TAGACATGTA TTCTAAAAGC GGATTTGTAA ATTTAGCATG CACAGTGTTT GATCAAATCA AGCATAGGAG CATTGTGACA TGGAACTCAA TGCTCTGCGG GTTTTCTCAG AATGGTAACT CCTTAGAGGC GATTAATCTC TTCGACTATT TGTATCATAG CTGCCTCGAG ATAAATGAGG TTACATTTTT GGCGGTTATT CAAGCGTGCT CAAGCATAGG TTCACTGGAG AAAGGGAGAT GGGTTCATCA CAAGCTCATC GTTTGCGGTA TAAAGGATCT TTTTACTGAT ACAGCTCTAA TCGACATGTA TGCCAAATGT GGAGATCTCA ACACAGCGGA AACCGTCTTC AGGGCCATGT CGAATAGGAG CATTGTGTCA TGGAGTAGTA TGATAAACGC GTATGGAATG CACGGACGGA TAGGATCCAC CATATCTACA TTCAATCAAA TGGTGGAATC CGGAACCAAA CCTAACGAGG TTGTCTTCAT GAACGTTCTC TCTGCTTGTG GTCACTCTGG TTCCGTTGAA GAAGGCAAGT ACTACTTTAA CTTGATGAAA TTATTTGGCG TATCACCAAA CTCGGAGCAT TTCGCCTGTT TCATCGACCT TTTGAGCCGT TCTGGTGATC TCAAAGAAGC ATATAGAACC ATCAAGGAGA TGCCTTTCCT AGCTGATGCT TCCGTTTGGG GTTCTCTGGT CAATGGATGC AGAATCCATC AGAAAATGGA TATCATCAAA GCCATTAAAA ATGACATTTC GGATATTGTT ACCGACGATA CGGGATACTA CACTCTTTTG TCCAATATAT ATGCTGAAGA AGGGGAATGG GAAGAATTCA GGAGAATGAG ATCGGCTATG AAGAGTTTGA ATCTCAAGAA AGTTCCTGGG TACAGCGCGA TTGAGATTGA TAAAAAAGTT TTCAGATTTG GAGCTGGGGA AGAAACCTGT TTCCAAACAG AAGATATCTA CATGTTTCTT GGGAATTTAC AGAATCTAAC TCTTGAAGAA GATTATTCAC AGATCAACGA ATGA |
| Length | 4044 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 12884070.. 12890085 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G69350.1 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.24621 |
Ahg937176 | F-box associated ubiquitination effector family protein |
| 15.2315 |
Ahg470863 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 24.98 |
Ahg311964 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 29.0689 |
Ahg919020 | Pentatricopeptide repeat (PPR-like) superfamily protein |
| 34.9857 |
Ahg470925 | Pentatricopeptide repeat (PPR) superfamily protein |
| 37.4166 |
Ahg950165 | Ribosomal protein L31 |
| 55.9464 |
Ahg897788 | Metal-dependent protein hydrolase |
| 56.6039 |
Ahg948632 | RNA helicase family protein |
| 60.4566 |
Ahg934416 | DNA binding with one finger 2.4 |
| 64.8999 |
Ahg492927 | Tetratricopeptide repeat (TPR)-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|