Detail



ID : Ahg937176

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937176|scaffold_501367.1
Sequence
GGTTTGGTTT ATTTCCCTGA TATGTGGACT TTAAACGTGG CATCATCGCC TGTGATTTGT AACCCTATCA CTGGAATGTA TGTGAGCTTA CCTGACCTTG CGAGGTATAG AAAGGCGCGA GGCTTTTTAG GGTTTGATCC TATTGAGAAG CAATTCAAGG CTTTGTCTGA GGCTTATGTG TTTTGTGATC AAAGGGATCA TCATCAGATT CTGACTTTAG GAACTACTGG AGAAGAACTC ACTTGGAGGA GTAATACTAT TCAATGTCCT GCGTATGATC GTTCTTTGAG TGAAGGGATA TGTATCAATG GGGTTTTGTA TTACTTAGCT GACACACGTT GTGAGTCGTC TTGTATGGTT GTTAGCTTTG ATCTTATGTC TGAGGAATTC AAGTTTATTC AAGCGGATTG CTTTTCTGAG CAACTTGATG AAACTAATGA GAGACCACTG GTTTTTGACC CGCAGCCGAC TAATGTTATG GAAGTGTTTT TGGCAACTGT GAGGATGGAC CGCCCGACTA ATACTATTAC ACTGGTTTTG GTTAACTATA AGGGTAAATT AGGTGCGATT GATTGGAAGT ATGTTGCTAA CGATGCTGAT GAACGGCGTA TCATTGAGTT GCGCTTGTGT GTTCTAGAGG ATGTCGAGAA AAATGAATGG TTGAAACATG TGTACACCTT GCCGGAGAAT GAAGTCTTTG ATTCATGCGA TGATTTTTCA GTTGCTGGAG TAACTAGTTC AGGTGATATC GTTTTGTCCA TGAAGCATGT GTGTAAACCT TTTTATGTGT TCTACTTCAA TCCCGAAAGG AACACTCTAC AAAGTGTTGA AATCCAAGGT TTTGGAGCTA ACCTTGAAGC CCCTGAGAAT CATGGTACAG TGTATGCCTT TGTCGACCAT GTAGAGGATC TCAGTGTTTG TGATGCAAAG CAACTCAAGT CAAGCATCAG TAATGTCAAG CATCTCTGCT CCTGCTGTGC CAAAGAAACG GAAGAGGCAG CAGGGAAGCT GAAAACAGAA GAAGACAATG AGAAGAAAGA GTGATAAAGG GCATTAGGAG GAGG 
Length1064
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11216843.. 11217948
Download Sequence
A.thaliana
AGI-codeAT3G56890.1
DescriptionF-box associated ubiquitination effector family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.24621 Ahg339169 Tetratricopeptide repeat (TPR)-like superfamily protein
9.48683 Ahg496832 P-loop containing nucleoside triphosphate hydrolases superfamily protein
11.3137 Ahg496493 histone deacetylase 6
14.1421 Ahg488786 mitochondrial editing factor 18
15.2315 Ahg924045 calpain-type cysteine protease family
15.5885 Ahg482187 Pentatricopeptide repeat (PPR-like) superfamily protein
17.4356 Ahg911763 nucleoporin 155
27.8209 Ahg921022 Nucleotide-diphospho-sugar transferases superfamily protein
28.3725 Ahg923761 NUP50 (Nucleoporin 50 kDa) protein
29.1204 Ahg930806 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression