Detail



ID : Ahg347136

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|347136|fgenesh1_pg.C_scaffold_5000528
Sequence
ATGGATTCGC AAATCATCTC AGATAAAGCG GAGGCTGAAC GAATTGTTAA GAATGTAGCA CGTTGCATTG CCAGAAAAGG GTTGAAGTAT GAGAAGAGGA TGATGACCAA CGTCAAAGAT CCAAGAATCA ACTTTCTGAG GAACCCTGAA GATCCCTTAC ACGGATATTA CAAGCAGAAG CTTAGTGATT ACCTTTCTCA GATTCAACAA AATGGAACTA TTGTTGATGA TTTTGGTCAT GTTGTAGTTA GTACCCAAGT CACTGAGCCA CCTCCAGGTA TCATCAGAAA TGATATCGAG AATATGGCCC TTTACATTTC CAAAGGTGGG TTGGTGTTTG AGAGCGTCAT GAGGCATCTT GTTGCAGATG AAGCAAGATA CAGCTTTATG GCTAGTTCCC ATCCCTTTCA CGCGTTTTAC CAGCAGAAGC TTACCGAATA TCGTTCTATC AATCAACAAG ACGGAGGAGC TAATCTTGAT TATGATGCTA CTCTTGCTGT TTACAAGCAA AAGGCTACCG AATTCCGTTC TTGGATTCAA CAAGAGGGAG CTAATCTTGA TTATGATGCT GATGCTGCTG GTCAACGCAT TGTTCTGCCA TATTTTCTCG ACCTTAGACT TCCTAAAGGG ATGAGTGGCA AGGATTTTAG AACTATGAAG CTCACAGCTC AGTTTGGGGC TTGGTATGGA AACGATTTCT GGCTGGGGTT CAAGAACAGA GATGGGTTTG AGTTTACGAA TCCAACTGAT AGCAAGTTCC CACGTTTCAC TCGGTTTGTT CTCGAGTATT CAGAAGTATT TAATCCCCCT AAAGATTTGA AAGAAAAGGT TAGCAAGAGT CATGCTTATA TGTCGGCCAT ACATGATGGT TTTTTCCGTC TTGTTAATCA GTGGGATTCT CTCCAAGATT TGAAATGGCA CGATGGAGGG GTGATGTCTA TGGTTCGTTG GCATGCTTCT CTCGTGAAAG ATTTTGCTAA CAATGAAGAG CTGCCACACC CTGAAACCAC TGGTGTCGAA GGTCGTGAGG TAAACATCAT TGAGAAAACA GTGCAGTCGT TATCGGAAAA CGTGGCGAGT TTCAAGGAGA AAATAGCCGA GGAGGTCCGA AGTATCCCAC CAGAGAAACA GGTGTTATTC GGAAAAGCCG GGTTGTTGAA GGACAACAAC AGGTCACTAG CACATTACAA TGTGGGAGCA GGAGAAATCC TTACTCTGTC CTTGTGTACG TGTGGGAGAG AGACAGATTT GGACAAGCCT TGTTGTTGCA CGGAATTGTT TAACAACGCA CTTGGTGAGA TGATGCGATC TCATGCTTCT TGTTTTGATT GA 
Length1332
Protein Sequence
Protein Residue
Map Locationscaffold_5: 3684955.. 3686496
Download Sequence
A.thaliana
AGI-codeAT3G27600.1
DescriptionSWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg946737 Proteinase inhibitor I25, cystatin, conserved region
3.74166 Ahg949673 DEAD-box protein abstrakt, putative
4.24264 Ahg485149
6 Ahg479390
6.7082 Ahg902795 WD40/YVTN repeat-like-containing domain;Bromodomain
7.07107 Ahg937735 SER/ARG-rich protein 34A
7.14143 Ahg472931 Ribosome associated membrane protein RAMP4
7.54983 Ahg931157 proline iminopeptidase
8.06226 Ahg470898 decapping 1
8.7178 Ahg470813 ER-type Ca2+-ATPase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression