Detail



ID : Ahg949673

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949673|scaffold_801560.1
Sequence
GAATTCTCGA AATTGAATCA ATGGAAGAAG ATGATAGTTA CGTTGAGTAT GTACCAGTGG CGGAGCGCAG AGCTATGGAA GCGCAGAAGA TACTTCAGCG GAAGGGAAAA GCTTCAGAAT TGGAGGAAGA AGCTGAAAAG GAAAAGCTCG CTGAAGCTAA ACCTAGTTTA CTTGTTCAAG CAACTCAGCT CAAGCGTGAT GTTCCCCAAG TTAGTGCTAC TGAGCAAATC ATCTTACAAG AGAAAGAGAT GATGGAGCAT TTATCTGATA AGAAGACGCT TATGTCTGTT CGTGAGCTTG CCAAAGGTAT CACTTATACA GAGCCTCTTT TAACTGGGTG GAAACCTCCT TTGCATATTA GGAGAATGTC GAATAAACAG AGAGATTTGA TTAGGAAGCA ATGGCATATT ATTGTTAATG GTGATGATAT TCCTCCTCCT ATCAAGAACT TCAAGGATAT GAAGTTTCCT AGACCTGTTC TTGATACGCT CAAGGAGAAG GGGATTGTGC AACCTACTCC TATTCAAGTT CAGGGTCTTC CTGTGATTTT GGCTGGGAGA GATATGATTG GGATTGCGTT CACCGGTTCA GGAAAGACTT TGGTTTTCGT GCTTCCTATG ATCATGATTG CTCTTCAAGA AGAGATGATG ATGCCTATTG CTGCTGGAGA AGGTCCCATT GGGCTTATTG TTTGCCCTTC TAGAGAGCTT GCTAGGCAGA CTTATGAAGT GGTTGAGCAG TTTGTTGCTC CTTTGGTTGA GGCTGGATAC CCGCCATTGA GGTCGTTGCT ATGTATTGGA GGAATTGATA TGAGATCACA GTTGGAGGTT GTCAAGAGAG GGGTACACAT CGTTGTTGCA ACCCCTGGGA GGTTAAAGGA TATGCTCGCC AAGAAAAAGA TGAGCTTAGA TGCTTGCAGG TACCTGACAC TAGATGAGGC AGATAGGTTG GTTGATTTGG GTTTCGAAGA TGACATAAGG GAAGTCTTTG ACCACTTTAA GTCTCAACGT CAAACACTTT TGTTTTCTGC CACAATGCCC ACAAAAATTC AAATCTTTGC CAGAAGTGCT CTGGTGAAAC CTGTGACAGT TAATGTAGGA AGAGCTGGAG CTGCGAATCT TGATGTGATC CAGGAGGTAG AATATGTCAA ACAAGAAGCA AAGATTGTTT ACCTCCTTGA GTGTCTACAG AAAACCTCTC CACCGGTTTT AATATTCTGT GAGAACAAAG CTGATGTTGA TGATATTCAC GAGTACTTGT TACTGAAAGG AGTGGAAGCA GTGGCCATCC ATGGAGGAAA AGATCAAGAA GACAGAGAGT ATGCAATATC TTCGTTTAAA GCTGGGAAAA AAGATGTCTT GGTCGCGACT GATGTTGCTT CAAAGGGTCT AGATTTCCCA GATATACAAC ATGTAATCAA CTACGACATG CCAGCAGAGA TTGAGAACTA TGTGCATAGG ATAGGACGAA CAGGTCGGTG TGGTAAAACT GGGATAGCAA CAACATTTAT AAACAAGAAT CAAAGCGAAA CCACGCTGCT CGATTTGAAA CACTTGTTGC AAGAAGCTAA ACAGAGGATT CCACCTGTCC TTGCTGAGCT GAATGATCCA ATGGAAGAAG CAGAGACCAT TGCTAATGCA AGTGGTGTCA AAGGTTGTGC GTATTGTGGT GGTCTTGGAC ATCGTATCCG AGACTGTCCA AAACTTGAGC ACCAGAAGAG TGTGGCTATA TCTAATTCGA GAAAAGACTA TTTTGGCTCT GGTGGCTACA GAGGAGAAAT ATAATCTTGT TTTGATTTCT TTAC 
Length1804
Protein Sequence
Protein Residue
Map Locationscaffold_8: 13582886.. 13585099
Download Sequence
A.thaliana
AGI-codeAT5G51280.1
DescriptionDEAD-box protein abstrakt, putative
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg888770 F-box family protein
3 Ahg946737 Proteinase inhibitor I25, cystatin, conserved region
3.74166 Ahg347136 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein
5.2915 Ahg490436
7.07107 Ahg479589 ubiquitin-specific protease 14
7.2111 Ahg471392 ACT domain repeat 8
8 Ahg480005 Helicase/SANT-associated, DNA binding protein
8.7178 Ahg483801 inner membrane protein OXA1-like
12.3693 Ahg922436 RING/FYVE/PHD zinc finger superfamily protein
13.5647 Ahg488990 Phosphoinositide phosphatase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression