Detail


ID : Ahg350148

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|350148|fgenesh1_pg.C_scaffold_6000741
Sequence
ATGTACCGGC CGCTGCAATC TGGGGGAAAT TTAGTTATGT TGTTTAAAGG ATGCAGACGG TTTGTGAGAA CAACGTGTCG CGTTTCGATC CCTGGTGGTT CTTTGGGAAA TGAATCAGAA GCACCTCCAA GGTTTCTGAG GGATAAAAAG ATAGTTCCAG ATGCTGATCC TCCCAATATG GAAGATATTA ATAAGTTGTA TCGACTTTTT GAGCAAAGTT CGAGACTCAC CATCTTGACT GGAGCTGGGA TTAGCACAGA ATGTGGAATT CCGGATTATA GAAGTCCCAA TGGAGCTTAC AGTTCTGGTT TCAAACCAAT TACCCATCAG GAATTCACTC GATCGAGCCG AGCTCGTAGG CGGTATTGGG CAAGGAGTTA CGCTGGATGG AGACGGTTCA CTGCAGCACA ACCTGGACCA GTGCATACTG CTTTAGCATC ACTAGAAAAA GCTGGACGAA TAAATTTTAT GATCACACAG AACGTTGACA GGCTGCATCA TCGTGCTGGG AGCGATCCAC TTGAATTACA TGGCACAGTA TATACTGTTA TGTGCTTAGA TTGCGGCTTC TCTTTTCCCC GAGACTTGTT TCAGGATCAG CTAAAAGCTA TCAATCCTAA GGCCAGTTGG GCAGAAGCAA TAGAAAGTAT CGATCATGGA GATCCAGGGT CAGAGAAGAG CTTTGGCATG AAACAAAGGC CTGATGGTGA TATTGAGATT GACGAAAAGT TTTGGGAAGA AGGTTTTCAT ATACCTGTAT GTGAGAAGTG CAAAGGAGTC CTAAAGCCGG ATGTAATTTT CTTTGGAGAC AACATCCCGA AGGAAAGAGC TACTCAAGCA ATGGAAATTG CAAAACAGAG CGATGCATTT CTCGTGTTGG GTTCATCCTT AATGACAATG TCCGCTTTTC GCCTTGTCAG AGCGGCTCAT GAGGCTGGTG CTATGACTGC AATTGTAAAT ATAGGCGAAA CAAGAGCTGA TGACCTTGTT CCATTGAAAA TCAATGCTAG AGTTGGTGAG ATATTGCACA GAGTTCTTGA CGTGGGGTCG CTCAGTGTCC CAGCTCACTA G
Length1071
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3545683.. 3547459
Download Sequence
A.thaliana
AGI-codeAT5G09230.7
Descriptionsirtuin 2
TAIR curator summaryEncodes SRT2, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).
Alias[AtSRT2][SRT2][SIRTUIN 2][sirtuin 2]
Gene coexpression
MR
MR Locus Description
7.74597 Ahg481248 NAD(P)-binding Rossmann-fold superfamily protein
8.48528 Ahg948218
10.0995 Ahg470500 dentin sialophosphoprotein-related
12 Ahg495100 Adenylate kinase family protein
20 Ahg943115 sterol-4alpha-methyl oxidase 1-1
20.199 Ahg938953 farnesyltransferase A
20.199 Ahg489050 Calcium-dependent phosphotriesterase superfamily protein
24.4949 Ahg923615 ARM repeat superfamily protein
25.3772 Ahg494882 ADP glucose pyrophosphorylase 1
26.6458 Ahg479746 putative mitochondrial RNA helicase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression